RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	LRRFIP2	Q9Y608	721 aa	Known RBP	15.03	■□□□□ -0
FANCA-231	ENST00000568626	CCDC24	Q8N4L8	307 aa		15.02	■□□□□ -0
FANCA-231	ENST00000568626	RPGR	Q92834	1020 aa	Known RBP	15.02	■□□□□ -0
FANCA-231	ENST00000568626	KAZALD1	Q96I82	304 aa		15.02	■□□□□ -0
FANCA-231	ENST00000568626	FHDC1	Q9C0D6	1143 aa	Predicted RBP	15.02	■□□□□ -0
FANCA-231	ENST00000568626	BICC1	Q9H694	974 aa	Known RBP	15.02	■□□□□ -0
FANCA-231	ENST00000568626		H0YIN7	160 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	CSF1R	P07333	972 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	NPR1	P16066	1061 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	FOXO4	P98177	505 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	MTX1	Q13505	466 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	TTLL11	Q8NHH1	800 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	SYT17	Q9BSW7	474 aa		15.01	□□□□□ -0.01
FANCA-231	ENST00000568626	SRGN	P10124	158 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	HOXA10	P31260	410 aa	Predicted RBP	15	□□□□□ -0.01
FANCA-231	ENST00000568626	EPHA10	Q5JZY3	1008 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	STYK1	Q6J9G0	422 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	C2CD5	Q86YS7	1000 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	ANKRD44	Q8N8A2	993 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	MASTL	Q96GX5	879 aa		15	□□□□□ -0.01
FANCA-231	ENST00000568626	RBM17	Q96I25	401 aa	Known RBP	15	□□□□□ -0.01
FANCA-231	ENST00000568626	FAM161A	Q3B820	660 aa		14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	LMBR1L	Q6UX01	489 aa		14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	C3orf67	Q6ZVT6	689 aa		14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	DDX46	Q7L014	1031 aa	Known RBP	14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	KLHL34	Q8N239	644 aa		14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	CDC5L	Q99459	802 aa	Known RBP	14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	CHMP3	Q9Y3E7	222 aa		14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	BRCA1	P38398	1863 aa	Known RBP	14.99	□□□□□ -0.01
FANCA-231	ENST00000568626	IFIT5	Q13325	482 aa	Known RBP	14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	CCDC57	Q2TAC2	916 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	RPAP2	Q8IXW5	612 aa	Predicted RBP	14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	EXOC6	Q8TAG9	804 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	CNKSR1	Q969H4	720 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	CRAMP1	Q96RY5	1269 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	GREM2	Q9H772	168 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	C1orf115	Q9H7X2	142 aa		14.98	□□□□□ -0.01
FANCA-231	ENST00000568626	ANKRD18B	A2A2Z9	1011 aa		14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	HMMR	O75330	724 aa		14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	ALDH1B1	P30837	517 aa		14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	IRX6	P78412	446 aa	Predicted RBP	14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	CEP85	Q6P2H3	762 aa		14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	TMC4	Q7Z404	712 aa		14.97	□□□□□ -0.01
FANCA-231	ENST00000568626	SRGAP3	O43295	1099 aa		14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	DPEP1	P16444	411 aa		14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	ITGA6	P23229	1130 aa		14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	CHRNA5	P30532	468 aa		14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	GRAP	Q13588	217 aa		14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	GRAPL	Q8TC17	118 aa	Predicted RBP	14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	CCDC85A	Q96PX6	553 aa	Predicted RBP	14.96	□□□□□ -0.01
FANCA-231	ENST00000568626	LRRC37A	A6NMS7	1700 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	IGHMBP2	P38935	993 aa	Known RBP	14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	ATP8B2	P98198	1209 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	TAF7L	Q5H9L4	462 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	ERICH6B	Q5W0A0	696 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	SSH3	Q8TE77	659 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	ZNF622	Q969S3	477 aa	Known RBP eCLIP	14.95	□□□□□ -0.02	2e-6	■□□□□ 8.4
FANCA-231	ENST00000568626	FBXO3	Q9UK99	471 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	CACNA1S	Q13698	1873 aa		14.95	□□□□□ -0.02
FANCA-231	ENST00000568626	BBOX1	O75936	387 aa		14.94	□□□□□ -0.02
FANCA-231	ENST00000568626	ANKRD18A	Q8IVF6	992 aa		14.94	□□□□□ -0.02
FANCA-231	ENST00000568626	TTLL6	Q8N841	843 aa		14.94	□□□□□ -0.02
FANCA-231	ENST00000568626	PIM2	Q9P1W9	311 aa		14.94	□□□□□ -0.02
FANCA-231	ENST00000568626	SPEF2	Q9C093	1822 aa		14.94	□□□□□ -0.02
FANCA-231	ENST00000568626		A0A0G2JLW4	131 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	RPS8	P62241	208 aa	Known RBP	14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	POLA2	Q14181	598 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	PRPF40B	Q6NWY9	871 aa	Known RBP	14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	NLGN2	Q8NFZ4	835 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	MPHOSPH8	Q99549	860 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	COPRS	Q9NQ92	184 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	SEC31B	Q9NQW1	1179 aa		14.93	□□□□□ -0.02
FANCA-231	ENST00000568626	ARFGEF1	Q9Y6D6	1849 aa		14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	PNMA6E	A0A0J9YXQ4	647 aa		14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	PPEF1	O14829	653 aa	Predicted RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	KCNA3	P22001	575 aa		14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	RFX5	P48382	616 aa	Predicted RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	DALRD3	Q5D0E6	543 aa	Known RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	ZNF784	Q8NCA9	323 aa	Predicted RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	CELF1	Q92879	486 aa	Known RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	TMX4	Q9H1E5	349 aa	Predicted RBP	14.92	□□□□□ -0.02
FANCA-231	ENST00000568626	TAF1	P21675	1872 aa		14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	CIAO1	O76071	339 aa		14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	PTPN12	Q05209	780 aa	Known RBP	14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	SOGA3	Q5TF21	947 aa		14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	CC2D2B	Q6DHV5	1058 aa		14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	BSDC1	Q9NW68	430 aa	Predicted RBP	14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	PCDHB15	Q9Y5E8	787 aa		14.91	□□□□□ -0.02
FANCA-231	ENST00000568626	COL4A1	P02462	1669 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	SLX4	Q8IY92	1834 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	HDAC1	Q13547	482 aa	Predicted RBP	14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	GRIPAP1	Q4V328	841 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	HSP90AB4P	Q58FF6	505 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	LDHAL6A	Q6ZMR3	332 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	SIRT2	Q8IXJ6	389 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	CNNM1	Q9NRU3	951 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	ATP6V0A2	Q9Y487	856 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626		A0A1B0GUL6	1792 aa		14.9	□□□□□ -0.02
FANCA-231	ENST00000568626	GOLGB1	Q14789	3259 aa	Known RBP	14.89	□□□□□ -0.03
FANCA-231	ENST00000568626	EYA2	O00167	538 aa		14.89	□□□□□ -0.03

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