RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	MAP3K15	Q6ZN16	1313 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	PPIP5K2	O43314	1243 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	CELF2	O95319	508 aa	Known RBP	10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	HOXA10	P31260	410 aa	Predicted RBP	10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	GNAI1	P63096	354 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	EXOSC9	Q06265	439 aa	Known RBP	10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	AOC3	Q16853	763 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	KIF6	Q6ZMV9	814 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	TTLL7	Q6ZT98	887 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	USP50	Q70EL3	339 aa	Predicted RBP	10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	WDR63	Q8IWG1	891 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	RBM17	Q96I25	401 aa	Known RBP	10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	ZBTB3	Q9H5J0	574 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	CASP8AP2	Q9UKL3	1982 aa		10.85	□□□□□ -0.67
TSC2-223	ENST00000568566	FANCI	Q9NVI1	1328 aa		10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	ERVV-1	B6SEH8	477 aa		10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	MYL6B	P14649	208 aa		10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	SUSD4	Q5VX71	490 aa		10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	GPRC5D	Q9NZD1	345 aa		10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.84	□□□□□ -0.67
TSC2-223	ENST00000568566	GMPS	P49915	693 aa	Predicted RBP	10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	SLFN5	Q08AF3	891 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	GRIPAP1	Q4V328	841 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	LRP10	Q7Z4F1	713 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	SAPCD2	Q86UD0	394 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	ZNF428	Q96B54	188 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	YTHDC1	Q96MU7	727 aa	Known RBP	10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	CRAMP1	Q96RY5	1269 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	MCOLN1	Q9GZU1	580 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	ZNF408	Q9H9D4	720 aa		10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	ADARB2	Q9NS39	739 aa	Known RBP	10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	TNRC18	O15417	2968 aa	Predicted RBP	10.83	□□□□□ -0.68
TSC2-223	ENST00000568566	NTSR2	O95665	410 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	MAP2K2	P36507	400 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	RGS19	P49795	217 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	CXCL9	Q07325	125 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	NCBP3	Q53F19	620 aa	Known RBP	10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	TRMT2A	Q8IZ69	625 aa	Known RBP	10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	BABAM1	Q9NWV8	329 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	IL16	Q14005	1332 aa		10.82	□□□□□ -0.68
TSC2-223	ENST00000568566	CA12	O43570	354 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	VAMP4	O75379	141 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	GOLGA2	Q08379	1002 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	CIAPIN1	Q6FI81	312 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	G2E3	Q7L622	706 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	TMX4	Q9H1E5	349 aa	Predicted RBP	10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	ZNRF3	Q9ULT6	936 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	ATP6V0A2	Q9Y487	856 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	ABCC4	O15439	1325 aa		10.81	□□□□□ -0.68
TSC2-223	ENST00000568566	SHTN1	A0MZ66	631 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	RAD17	O75943	681 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	BRPF1	P55201	1214 aa	Predicted RBP	10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	DGKZ	Q13574	1117 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	ZNF34	Q8IZ26	560 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	TRPM4	Q8TD43	1214 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	BCL2L13	Q9BXK5	485 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	PHAX	Q9H814	394 aa	Known RBP	10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	CHPF2	Q9P2E5	772 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	LAMB2	P55268	1798 aa		10.8	□□□□□ -0.68
TSC2-223	ENST00000568566	HIRA	P54198	1017 aa	Predicted RBP	10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	CALD1	Q05682	793 aa	Known RBP	10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	AIMP1	Q12904	312 aa	Known RBP	10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	DPP8	Q6V1X1	898 aa	Predicted RBP	10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	PPP1R42	Q7Z4L9	355 aa		10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	SUPT20H	Q8NEM7	779 aa		10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	HHIPL1	Q96JK4	782 aa		10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	NLRP3	Q96P20	1036 aa		10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	ZIC5	Q96T25	663 aa		10.79	□□□□□ -0.68
TSC2-223	ENST00000568566	TWISTNB	Q3B726	338 aa	Predicted RBP	10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	PARP10	Q53GL7	1025 aa		10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	HDGFL1	Q5TGJ6	251 aa		10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	DLK2	Q6UY11	383 aa		10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	XAGE3	Q8WTP9	111 aa		10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	UTP14A	Q9BVJ6	771 aa	Known RBP	10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	CDHR2	Q9BYE9	1310 aa		10.78	□□□□□ -0.68
TSC2-223	ENST00000568566	DUOX1	Q9NRD9	1551 aa		10.77	□□□□□ -0.68
TSC2-223	ENST00000568566	HCLS1	P14317	486 aa	Predicted RBP	10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	HUNK	P57058	714 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	KIAA2012	Q0VF49	1180 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	COPS6	Q7L5N1	327 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	USP48	Q86UV5	1035 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	MICALL2	Q8IY33	904 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	MPND	Q8N594	471 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	VPS33B	Q9H267	617 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	PGAP2	Q9UHJ9	254 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	ANKRD36C	Q5JPF3	1778 aa		10.77	□□□□□ -0.69
TSC2-223	ENST00000568566	TAF1	P21675	1872 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	YDJC	A8MPS7	323 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566		E9PSI1	815 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	NOG	Q13253	232 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	TNIP1	Q15025	636 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	CDC37L1	Q7L3B6	337 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	ZC3H15	Q8WU90	426 aa	Known RBP	10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	MYH16	Q9H6N6	1097 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	CNOT7	Q9UIV1	285 aa	Known RBP	10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	ERBB4	Q15303	1308 aa		10.76	□□□□□ -0.69
TSC2-223	ENST00000568566	BBOX1	O75936	387 aa		10.75	□□□□□ -0.69

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