RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
NEIL1-219ENST00000568519 ABCC4O15439 1325 aa17.98■□□□□ 0.47
NEIL1-219ENST00000568519 H0YIN7 160 aa17.97■□□□□ 0.47
NEIL1-219ENST00000568519 H7C1W4 665 aa17.97■□□□□ 0.47
NEIL1-219ENST00000568519 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
NEIL1-219ENST00000568519 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
NEIL1-219ENST00000568519 MS4A1P11836 297 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 STYK1Q6J9G0 422 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 CCDC24Q8N4L8 307 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
NEIL1-219ENST00000568519 UTYO14607 1347 aa17.96■□□□□ 0.46
NEIL1-219ENST00000568519 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
NEIL1-219ENST00000568519 SRGNP10124 158 aa17.95■□□□□ 0.46
NEIL1-219ENST00000568519 TRIM27P14373 513 aa17.95■□□□□ 0.46
NEIL1-219ENST00000568519 HOXA10P31260 410 aaPredicted RBP17.95■□□□□ 0.46
NEIL1-219ENST00000568519 INTS3Q68E01 1043 aaKnown RBP17.95■□□□□ 0.46
NEIL1-219ENST00000568519 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
NEIL1-219ENST00000568519 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
NEIL1-219ENST00000568519 GRM8O00222 908 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 IRS4O14654 1257 aaPredicted RBP17.94■□□□□ 0.46
NEIL1-219ENST00000568519 FOXN1O15353 648 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 NPR1P16066 1061 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
NEIL1-219ENST00000568519 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 TTLL6Q8N841 843 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 CACNA1SQ13698 1873 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
NEIL1-219ENST00000568519 MYH3P11055 1940 aa17.94■□□□□ 0.46
NEIL1-219ENST00000568519 FER1L6Q2WGJ9 1857 aa17.93■□□□□ 0.46
NEIL1-219ENST00000568519 CASP7P55210 303 aa17.93■□□□□ 0.46
NEIL1-219ENST00000568519 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
NEIL1-219ENST00000568519 CNKSR1Q969H4 720 aa17.93■□□□□ 0.46
NEIL1-219ENST00000568519 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
NEIL1-219ENST00000568519 PDE8AO60658 829 aa17.92■□□□□ 0.46
NEIL1-219ENST00000568519 ALDH1B1P30837 517 aa17.92■□□□□ 0.46
NEIL1-219ENST00000568519 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
NEIL1-219ENST00000568519 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
NEIL1-219ENST00000568519 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
NEIL1-219ENST00000568519 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
NEIL1-219ENST00000568519 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
NEIL1-219ENST00000568519 C21orf2O43822 256 aa17.9■□□□□ 0.46
NEIL1-219ENST00000568519 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
NEIL1-219ENST00000568519 RPGRQ92834 1020 aaKnown RBP17.9■□□□□ 0.46
NEIL1-219ENST00000568519 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
NEIL1-219ENST00000568519 SLX4Q8IY92 1834 aa17.89■□□□□ 0.45
NEIL1-219ENST00000568519 DDNO94850 711 aaPredicted RBP17.89■□□□□ 0.45
NEIL1-219ENST00000568519 DZIP1LQ8IYY4 767 aaKnown RBP17.89■□□□□ 0.45
NEIL1-219ENST00000568519 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
NEIL1-219ENST00000568519 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.45
NEIL1-219ENST00000568519 USP44Q9H0E7 712 aa17.89■□□□□ 0.45
NEIL1-219ENST00000568519 CTSWP56202 376 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 CCDC152Q4G0S7 254 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 CHADLQ6NUI6 762 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 TMC4Q7Z404 712 aa17.88■□□□□ 0.45
NEIL1-219ENST00000568519 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
NEIL1-219ENST00000568519 CSF1RP07333 972 aa17.87■□□□□ 0.45
NEIL1-219ENST00000568519 GRIPAP1Q4V328 841 aa17.87■□□□□ 0.45
NEIL1-219ENST00000568519 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
NEIL1-219ENST00000568519 BBOX1O75936 387 aa17.86■□□□□ 0.45
NEIL1-219ENST00000568519 GNAI3P08754 354 aa17.86■□□□□ 0.45
NEIL1-219ENST00000568519 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
NEIL1-219ENST00000568519 C3orf67Q6ZVT6 689 aa17.86■□□□□ 0.45
NEIL1-219ENST00000568519 DDX46Q7L014 1031 aaKnown RBP17.86■□□□□ 0.45
NEIL1-219ENST00000568519 TTLL11Q8NHH1 800 aa17.86■□□□□ 0.45
NEIL1-219ENST00000568519 NBPF7P0C2Y1 421 aaPredicted RBP17.85■□□□□ 0.45
NEIL1-219ENST00000568519 CNTNAP1P78357 1384 aa17.85■□□□□ 0.45
NEIL1-219ENST00000568519 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
NEIL1-219ENST00000568519 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
NEIL1-219ENST00000568519 PRPF40BQ6NWY9 871 aaKnown RBP17.85■□□□□ 0.45
NEIL1-219ENST00000568519 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
NEIL1-219ENST00000568519 VEGFBP49765 207 aa17.84■□□□□ 0.45
NEIL1-219ENST00000568519 FOXO4P98177 505 aa17.84■□□□□ 0.45
NEIL1-219ENST00000568519 GRAPQ13588 217 aa17.84■□□□□ 0.45
NEIL1-219ENST00000568519 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
NEIL1-219ENST00000568519 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
NEIL1-219ENST00000568519 GRAPLQ8TC17 118 aaPredicted RBP17.84■□□□□ 0.45
NEIL1-219ENST00000568519 LRRC37AA6NMS7 1700 aa17.84■□□□□ 0.45
NEIL1-219ENST00000568519 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
NEIL1-219ENST00000568519 C7orf43Q8WVR3 580 aa17.83■□□□□ 0.44
NEIL1-219ENST00000568519 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
NEIL1-219ENST00000568519 CDC5LQ99459 802 aaKnown RBP17.83■□□□□ 0.44
NEIL1-219ENST00000568519 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
NEIL1-219ENST00000568519 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
NEIL1-219ENST00000568519 RLBP1P12271 317 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 LBX1P52954 281 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 KAZALD1Q96I82 304 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 SUCLG2Q96I99 432 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
NEIL1-219ENST00000568519 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
NEIL1-219ENST00000568519 SLC34A2O95436 690 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms