RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 NR1I2O75469 434 aa25.49■■□□□ 1.67
DENND4A-208ENST00000568515 SLIT1O75093 1534 aa25.49■■□□□ 1.67
DENND4A-208ENST00000568515 PLEKHO1Q53GL0 409 aaPredicted RBP25.49■■□□□ 1.67
DENND4A-208ENST00000568515 PGBD1Q96JS3 809 aa25.49■■□□□ 1.67
DENND4A-208ENST00000568515 ARHGAP23Q9P227 1491 aa25.48■■□□□ 1.67
DENND4A-208ENST00000568515 UTYO14607 1347 aa25.48■■□□□ 1.67
DENND4A-208ENST00000568515 ZSCAN25Q6NSZ9 544 aa25.48■■□□□ 1.67
DENND4A-208ENST00000568515 LMO7Q8WWI1 1683 aa25.48■■□□□ 1.67
DENND4A-208ENST00000568515 RNMTO43148 476 aaKnown RBP25.48■■□□□ 1.67
DENND4A-208ENST00000568515 ZNF165P49910 485 aa25.48■■□□□ 1.67
DENND4A-208ENST00000568515 ZNF589Q86UQ0 364 aaPredicted RBP25.48■■□□□ 1.67
DENND4A-208ENST00000568515 BICD2Q8TD16 824 aa25.47■■□□□ 1.67
DENND4A-208ENST00000568515 JCADQ9P266 1359 aa25.47■■□□□ 1.67
DENND4A-208ENST00000568515 SIL1Q9H173 461 aa25.46■■□□□ 1.67
DENND4A-208ENST00000568515 DNAJC25Q9H1X3 360 aa25.46■■□□□ 1.67
DENND4A-208ENST00000568515 PRAMEF22A3QJZ6 481 aa25.45■■□□□ 1.67
DENND4A-208ENST00000568515 TAF5LO75529 589 aa25.45■■□□□ 1.67
DENND4A-208ENST00000568515 HEG1Q9ULI3 1381 aa25.45■■□□□ 1.66
DENND4A-208ENST00000568515 JAK2O60674 1132 aa25.45■■□□□ 1.66
DENND4A-208ENST00000568515 KCNA6P17658 529 aa25.45■■□□□ 1.66
DENND4A-208ENST00000568515 LRRC59Q96AG4 307 aaKnown RBP25.45■■□□□ 1.66
DENND4A-208ENST00000568515 C16orf45Q96MC5 204 aaPredicted RBP25.45■■□□□ 1.66
DENND4A-208ENST00000568515 RESTQ13127 1097 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 GTF3C6Q969F1 213 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 SPDYE4A6NLX3 237 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 SMTNL1A8MU46 457 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 KRT32Q14532 448 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 USPL1Q5W0Q7 1092 aa25.44■■□□□ 1.66
DENND4A-208ENST00000568515 AMOTQ4VCS5 1084 aa25.43■■□□□ 1.66
DENND4A-208ENST00000568515 C1orf141Q5JVX7 400 aa25.43■■□□□ 1.66
DENND4A-208ENST00000568515 GTPBP4Q9BZE4 634 aaKnown RBP25.43■■□□□ 1.66
DENND4A-208ENST00000568515 CLIP2Q9UDT6 1046 aa25.43■■□□□ 1.66
DENND4A-208ENST00000568515 DDX58O95786 925 aaKnown RBP25.43■■□□□ 1.66
DENND4A-208ENST00000568515 U2AF2P26368 475 aaKnown RBP eCLIP25.43■■□□□ 1.662e-7■■■□□ 17.5
DENND4A-208ENST00000568515 BRF1Q92994 677 aa25.43■■□□□ 1.66
DENND4A-208ENST00000568515 ZHX1Q9UKY1 873 aaPredicted RBP25.43■■□□□ 1.66
DENND4A-208ENST00000568515 CAVIN2O95810 425 aa25.42■■□□□ 1.66
DENND4A-208ENST00000568515 TNNT1P13805 278 aa25.42■■□□□ 1.66
DENND4A-208ENST00000568515 NFAT5O94916 1531 aa25.42■■□□□ 1.66
DENND4A-208ENST00000568515 PHF8Q9UPP1 1060 aa25.42■■□□□ 1.66
DENND4A-208ENST00000568515 RGPD2P0DJD1 1756 aa25.41■■□□□ 1.66
DENND4A-208ENST00000568515 NCBP1Q09161 790 aaKnown RBP25.41■■□□□ 1.66
DENND4A-208ENST00000568515 AIMP1Q12904 312 aaKnown RBP25.41■■□□□ 1.66
DENND4A-208ENST00000568515 SYCP1Q15431 976 aa25.41■■□□□ 1.66
DENND4A-208ENST00000568515 KLHDC4Q8TBB5 520 aa25.41■■□□□ 1.66
DENND4A-208ENST00000568515 CACTINQ8WUQ7 758 aaKnown RBP25.41■■□□□ 1.66
DENND4A-208ENST00000568515 EDC3Q96F86 508 aaKnown RBP25.41■■□□□ 1.66
DENND4A-208ENST00000568515 NEK1Q96PY6 1258 aa25.41■■□□□ 1.66
DENND4A-208ENST00000568515 CDC25BP30305 580 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 ZSCAN16Q9H4T2 348 aaPredicted RBP25.4■■□□□ 1.66
DENND4A-208ENST00000568515 NCAPD2Q15021 1401 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 H3BQV1 296 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 IFFO2Q5TF58 517 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 DDX11Q96FC9 970 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 DDX21Q9NR30 783 aaKnown RBP eCLIP25.4■■□□□ 1.66
DENND4A-208ENST00000568515 CFAP45Q9UL16 551 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 PAXBP1Q9Y5B6 917 aa25.4■■□□□ 1.66
DENND4A-208ENST00000568515 IGKV5-2P06315 115 aa25.39■■□□□ 1.66
DENND4A-208ENST00000568515 CCDC144BQ3MJ40 725 aa25.39■■□□□ 1.66
DENND4A-208ENST00000568515 CCDC144CPQ8IYA2 1237 aa25.39■■□□□ 1.66
DENND4A-208ENST00000568515 Q6ZUG5 572 aa25.39■■□□□ 1.65
DENND4A-208ENST00000568515 PXDNQ92626 1479 aa25.38■■□□□ 1.65
DENND4A-208ENST00000568515 IQCB1Q15051 598 aa25.38■■□□□ 1.65
DENND4A-208ENST00000568515 FEZ1Q99689 392 aa25.38■■□□□ 1.65
DENND4A-208ENST00000568515 COL15A1P39059 1388 aa25.38■■□□□ 1.65
DENND4A-208ENST00000568515 TPD52L1Q16890 204 aaPredicted RBP25.38■■□□□ 1.65
DENND4A-208ENST00000568515 OVOS2A0A0G2JMS6 1433 aa25.37■■□□□ 1.65
DENND4A-208ENST00000568515 HSP90B1P14625 803 aaKnown RBP25.37■■□□□ 1.65
DENND4A-208ENST00000568515 THEMISQ8N1K5 641 aaPredicted RBP25.37■■□□□ 1.65
DENND4A-208ENST00000568515 KCNH5Q8NCM2 988 aa25.37■■□□□ 1.65
DENND4A-208ENST00000568515 GOLGA6L19H0YKK7 550 aa25.37■■□□□ 1.65
DENND4A-208ENST00000568515 SARM1Q6SZW1 724 aa25.37■■□□□ 1.65
DENND4A-208ENST00000568515 ATP5JP18859 108 aa25.36■■□□□ 1.65
DENND4A-208ENST00000568515 PDIA6Q15084 440 aa25.36■■□□□ 1.65
DENND4A-208ENST00000568515 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
DENND4A-208ENST00000568515 MRC1P22897 1456 aa25.36■■□□□ 1.65
DENND4A-208ENST00000568515 CCDC112Q8NEF3 446 aa25.36■■□□□ 1.65
DENND4A-208ENST00000568515 U3KPZ7 1027 aaPredicted RBP25.36■■□□□ 1.65
DENND4A-208ENST00000568515 EPHA10Q5JZY3 1008 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 C11orf57Q6ZUT1 292 aaPredicted RBP25.34■■□□□ 1.65
DENND4A-208ENST00000568515 LRRC8AQ8IWT6 810 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 CTAGE5O15320 804 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 ADD1P35611 737 aaKnown RBP25.34■■□□□ 1.65
DENND4A-208ENST00000568515 CEBPZQ03701 1054 aaKnown RBP25.34■■□□□ 1.65
DENND4A-208ENST00000568515 SCRN1Q12765 414 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 SMARCC2Q8TAQ2 1214 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 MRFAP1L1Q96HT8 127 aa25.34■■□□□ 1.65
DENND4A-208ENST00000568515 DBNLQ9UJU6 430 aaKnown RBP25.34■■□□□ 1.65
DENND4A-208ENST00000568515 NEURL1BA8MQ27 555 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 CYP21A2P08686 494 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 NEXNQ0ZGT2 675 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 STX1AQ16623 288 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 CCDC129Q6ZRS4 1044 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 OGFRQ9NZT2 677 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 RCOR1Q9UKL0 485 aa25.33■■□□□ 1.65
DENND4A-208ENST00000568515 GCKRQ14397 625 aa25.32■■□□□ 1.64
DENND4A-208ENST00000568515 CEP135Q66GS9 1140 aa25.32■■□□□ 1.64
DENND4A-208ENST00000568515 CCAR1Q8IX12 1150 aaKnown RBP25.32■■□□□ 1.64
DENND4A-208ENST00000568515 LLPHQ9BRT6 129 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms