RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
COMMD4-223ENST00000568301 ABCC4O15439 1325 aa19.67■□□□□ 0.74
COMMD4-223ENST00000568301 LAMB2P55268 1798 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 FAM161AQ3B820 660 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 RUNDC1Q96C34 613 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 TSKSQ9UJT2 592 aa19.66■□□□□ 0.74
COMMD4-223ENST00000568301 GMPSP49915 693 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-223ENST00000568301 SAPCD2Q86UD0 394 aa19.65■□□□□ 0.74
COMMD4-223ENST00000568301 TRMT112Q9UI30 125 aaKnown RBP19.65■□□□□ 0.74
COMMD4-223ENST00000568301 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
COMMD4-223ENST00000568301 CCDC85CA6NKD9 419 aa19.64■□□□□ 0.73
COMMD4-223ENST00000568301 CELF2O95319 508 aaKnown RBP19.64■□□□□ 0.73
COMMD4-223ENST00000568301 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-223ENST00000568301 MAP2K2P36507 400 aa19.64■□□□□ 0.73
COMMD4-223ENST00000568301 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.73
COMMD4-223ENST00000568301 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
COMMD4-223ENST00000568301 GLIS2Q9BZE0 524 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-223ENST00000568301 SH3TC1Q8TE82 1336 aa19.64■□□□□ 0.73
COMMD4-223ENST00000568301 RAD17O75943 681 aa19.63■□□□□ 0.73
COMMD4-223ENST00000568301 HOXB7P09629 217 aa19.63■□□□□ 0.73
COMMD4-223ENST00000568301 DPP8Q6V1X1 898 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-223ENST00000568301 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
COMMD4-223ENST00000568301 MPNDQ8N594 471 aa19.63■□□□□ 0.73
COMMD4-223ENST00000568301 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
COMMD4-223ENST00000568301 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-223ENST00000568301 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
COMMD4-223ENST00000568301 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
COMMD4-223ENST00000568301 CIAPIN1Q6FI81 312 aa19.62■□□□□ 0.73
COMMD4-223ENST00000568301 PLBD2Q8NHP8 589 aa19.62■□□□□ 0.73
COMMD4-223ENST00000568301 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
COMMD4-223ENST00000568301 TAF1P21675 1872 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 GRAPQ13588 217 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 TMC4Q7Z404 712 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-223ENST00000568301 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-223ENST00000568301 ADAMTS8Q9UP79 889 aa19.61■□□□□ 0.73
COMMD4-223ENST00000568301 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
COMMD4-223ENST00000568301 TRPM4Q8TD43 1214 aa19.6■□□□□ 0.73
COMMD4-223ENST00000568301 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
COMMD4-223ENST00000568301 ZNF408Q9H9D4 720 aa19.6■□□□□ 0.73
COMMD4-223ENST00000568301 SHTN1A0MZ66 631 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 YDJCA8MPS7 323 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 TNIP1Q15025 636 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 HHIPL1Q96JK4 782 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
COMMD4-223ENST00000568301 CDHR2Q9BYE9 1310 aa19.58■□□□□ 0.73
COMMD4-223ENST00000568301 ZC3H15Q8WU90 426 aaKnown RBP19.58■□□□□ 0.72
COMMD4-223ENST00000568301 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
COMMD4-223ENST00000568301 ISCA1Q9BUE6 129 aa19.58■□□□□ 0.72
COMMD4-223ENST00000568301 HYPKQ9NX55 129 aa19.58■□□□□ 0.72
COMMD4-223ENST00000568301 CNOT7Q9UIV1 285 aaKnown RBP19.58■□□□□ 0.72
COMMD4-223ENST00000568301 TNRC18O15417 2968 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-223ENST00000568301 RGS19P49795 217 aa19.57■□□□□ 0.72
COMMD4-223ENST00000568301 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
COMMD4-223ENST00000568301 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
COMMD4-223ENST00000568301 CDC37L1Q7L3B6 337 aa19.57■□□□□ 0.72
COMMD4-223ENST00000568301 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
COMMD4-223ENST00000568301 CA12O43570 354 aa19.56■□□□□ 0.72
COMMD4-223ENST00000568301 SLC34A2O95436 690 aa19.56■□□□□ 0.72
COMMD4-223ENST00000568301 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-223ENST00000568301 MLLT1Q03111 559 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-223ENST00000568301 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
COMMD4-223ENST00000568301 DUSP27Q5VZP5 1158 aa19.56■□□□□ 0.72
COMMD4-223ENST00000568301 LRRC37AA6NMS7 1700 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 FAM89AQ96GI7 184 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 ZIC5Q96T25 663 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 MCOLN1Q9GZU1 580 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 DUOX1Q9NRD9 1551 aa19.55■□□□□ 0.72
COMMD4-223ENST00000568301 ZBTB12Q9Y330 459 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-223ENST00000568301 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
COMMD4-223ENST00000568301 H7C1D1 291 aa19.54■□□□□ 0.72
COMMD4-223ENST00000568301 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
COMMD4-223ENST00000568301 MBIPQ9NS73 344 aa19.54■□□□□ 0.72
COMMD4-223ENST00000568301 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
COMMD4-223ENST00000568301 SAMD7Q7Z3H4 446 aa19.53■□□□□ 0.72
COMMD4-223ENST00000568301 POLR2AP24928 1970 aaKnown RBP19.52■□□□□ 0.72
COMMD4-223ENST00000568301 PSMD14O00487 310 aa19.52■□□□□ 0.72
COMMD4-223ENST00000568301 WASHC4Q2M389 1173 aa19.52■□□□□ 0.72
COMMD4-223ENST00000568301 CELF1Q92879 486 aaKnown RBP19.52■□□□□ 0.72
COMMD4-223ENST00000568301 DBNDD1Q9H9R9 158 aa19.52■□□□□ 0.72
COMMD4-223ENST00000568301 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.72
COMMD4-223ENST00000568301 EGFRP00533 1210 aa19.51■□□□□ 0.71
COMMD4-223ENST00000568301 HUNKP57058 714 aa19.51■□□□□ 0.71
COMMD4-223ENST00000568301 CALD1Q05682 793 aaKnown RBP19.51■□□□□ 0.71
COMMD4-223ENST00000568301 NOGQ13253 232 aa19.51■□□□□ 0.71
COMMD4-223ENST00000568301 DPF2Q92785 391 aa19.51■□□□□ 0.71
COMMD4-223ENST00000568301 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-223ENST00000568301 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-223ENST00000568301 RIMBP2O15034 1052 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
COMMD4-223ENST00000568301 RPS8P62241 208 aaKnown RBP19.5■□□□□ 0.71
COMMD4-223ENST00000568301 DGKZQ13574 1117 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms