RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	MAFA	Q8NHW3	353 aa	Predicted RBP	10.39	□□□□□ -0.75
LYRM1-208	ENST00000567954	NKX2-3	Q8TAU0	364 aa		10.39	□□□□□ -0.75
LYRM1-208	ENST00000567954	P2RX7	Q99572	595 aa	Known RBP	10.39	□□□□□ -0.75
LYRM1-208	ENST00000567954	ZNF609	O15014	1411 aa		10.39	□□□□□ -0.75
LYRM1-208	ENST00000567954	ARFGEF2	Q9Y6D5	1785 aa		10.39	□□□□□ -0.75
LYRM1-208	ENST00000567954	CACNA1S	Q13698	1873 aa		10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	MKRN3	Q13064	507 aa	Known RBP	10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	DPF2	Q92785	391 aa		10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	TBC1D2B	Q9UPU7	963 aa		10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	HCN4	Q9Y3Q4	1203 aa		10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	PTCH2	Q9Y6C5	1203 aa		10.38	□□□□□ -0.75
LYRM1-208	ENST00000567954	IRS2	Q9Y4H2	1338 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	UBE2Q2L	H0YL09	131 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	RAD17	O75943	681 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	EGFR	P00533	1210 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	INHBE	P58166	350 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	CAP1	Q01518	475 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	TJP1	Q07157	1748 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	TDH	Q8IZJ6	230 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	VSIG10	Q8N0Z9	540 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	LAMB4	A4D0S4	1761 aa		10.37	□□□□□ -0.75
LYRM1-208	ENST00000567954	SP3	Q02447	781 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	ARHGEF6	Q15052	776 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	TPTE2	Q6XPS3	522 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	MOB2	Q70IA6	237 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	IFNL1	Q8IU54	200 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	CNKSR2	Q8WXI2	1034 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	C1QTNF1	Q9BXJ1	281 aa		10.36	□□□□□ -0.75
LYRM1-208	ENST00000567954	CAMTA2	O94983	1202 aa		10.35	□□□□□ -0.75
LYRM1-208	ENST00000567954	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.35	□□□□□ -0.75
LYRM1-208	ENST00000567954	PRAMEF22	A3QJZ6	481 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	FYB1	O15117	783 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	STARD3NL	O95772	234 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	GJA8	P48165	433 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	CRY2	Q49AN0	593 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	RBM26	Q5T8P6	1007 aa	Known RBP	10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	SH3TC2	Q8TF17	1288 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	GGNBP2	Q9H3C7	697 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	GGA3	Q9NZ52	723 aa		10.34	□□□□□ -0.75
LYRM1-208	ENST00000567954	MANSC4	A6NHS7	340 aa	Predicted RBP	10.33	□□□□□ -0.76
LYRM1-208	ENST00000567954	FAM161B	Q96MY7	647 aa		10.33	□□□□□ -0.76
LYRM1-208	ENST00000567954	IL6ST	P40189	918 aa	Predicted RBP	10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	TCIRG1	Q13488	830 aa		10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	AMOT	Q4VCS5	1084 aa		10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	CLEC4G	Q6UXB4	293 aa		10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	SUPT20H	Q8NEM7	779 aa		10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	CDX2	Q99626	313 aa	Predicted RBP	10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	EMILIN1	Q9Y6C2	1016 aa		10.32	□□□□□ -0.76
LYRM1-208	ENST00000567954	GJB1	P08034	283 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	HOXA10	P31260	410 aa	Predicted RBP	10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	KIAA2012	Q0VF49	1180 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	CRHR2	Q13324	411 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	MTFR1	Q15390	333 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	C1orf141	Q5JVX7	400 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	SPRYD7	Q5W111	196 aa		10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	PUS7	Q96PZ0	661 aa	Known RBP	10.31	□□□□□ -0.76
LYRM1-208	ENST00000567954	RAB3GAP2	Q9H2M9	1393 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	YDJC	A8MPS7	323 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	FARP2	O94887	1054 aa	Predicted RBP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	RPS12	P25398	132 aa	Known RBP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	SLC39A6	Q13433	755 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	KIF4B	Q2VIQ3	1234 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	NPM2	Q86SE8	214 aa	Known RBP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	SLC51A	Q86UW1	340 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	TMX4	Q9H1E5	349 aa	Predicted RBP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	ASTN2	O75129	1339 aa	Predicted RBP	10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	KIF7	Q2M1P5	1343 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	ANKRD26	Q9UPS8	1709 aa		10.3	□□□□□ -0.76
LYRM1-208	ENST00000567954	TCERG1	O14776	1098 aa	Known RBP	10.29	□□□□□ -0.76
LYRM1-208	ENST00000567954	PPM1G	O15355	546 aa	Predicted RBP	10.29	□□□□□ -0.76
LYRM1-208	ENST00000567954	MRE11	P49959	708 aa		10.29	□□□□□ -0.76
LYRM1-208	ENST00000567954	TTLL12	Q14166	644 aa	Predicted RBP	10.29	□□□□□ -0.76
LYRM1-208	ENST00000567954	ZNF697	Q5TEC3	545 aa		10.29	□□□□□ -0.76
LYRM1-208	ENST00000567954	CDH23	Q9H251	3354 aa		10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	PSMD14	O00487	310 aa		10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	MAGEA10	P43363	369 aa	Predicted RBP	10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	PTPN12	Q05209	780 aa	Known RBP	10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	ANGEL2	Q5VTE6	544 aa	Known RBP	10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	OTUD7B	Q6GQQ9	843 aa		10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	RPGR	Q92834	1020 aa	Known RBP	10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	SLC52A2	Q9HAB3	445 aa		10.28	□□□□□ -0.76
LYRM1-208	ENST00000567954	GTF2E1	P29083	439 aa	Predicted RBP	10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	DZIP3	Q86Y13	1208 aa	Known RBP	10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	CRAMP1	Q96RY5	1269 aa		10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	LRFN3	Q9BTN0	628 aa		10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	UBE2O	Q9C0C9	1292 aa	Known RBP	10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	ZNF652	Q9Y2D9	606 aa		10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	ATP6V0A2	Q9Y487	856 aa		10.27	□□□□□ -0.77
LYRM1-208	ENST00000567954	FOXK2	Q01167	660 aa		10.26	□□□□□ -0.77
LYRM1-208	ENST00000567954	SCARF1	Q14162	830 aa		10.26	□□□□□ -0.77
LYRM1-208	ENST00000567954	RBM17	Q96I25	401 aa	Known RBP	10.26	□□□□□ -0.77
LYRM1-208	ENST00000567954	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.26	□□□□□ -0.77
LYRM1-208	ENST00000567954	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
LYRM1-208	ENST00000567954	ZBTB48	P10074	688 aa	Predicted RBP	10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms