RNA–Protein interactions for RNA: ENST00000567011.1

CPNE2-209, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-209ENST00000567011 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
CPNE2-209ENST00000567011 TRMT112Q9UI30 125 aaKnown RBP16.54■□□□□ 0.24
CPNE2-209ENST00000567011 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
CPNE2-209ENST00000567011 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
CPNE2-209ENST00000567011 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
CPNE2-209ENST00000567011 MPNDQ8N594 471 aa16.53■□□□□ 0.24
CPNE2-209ENST00000567011 ABHD8Q96I13 439 aa16.53■□□□□ 0.24
CPNE2-209ENST00000567011 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
CPNE2-209ENST00000567011 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
CPNE2-209ENST00000567011 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
CPNE2-209ENST00000567011 DUOX1Q9NRD9 1551 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 BBOX1O75936 387 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 GRAPQ13588 217 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 GRAPLQ8TC17 118 aaPredicted RBP16.52■□□□□ 0.24
CPNE2-209ENST00000567011 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
CPNE2-209ENST00000567011 COL4A1P02462 1669 aa16.52■□□□□ 0.23
CPNE2-209ENST00000567011 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.23
CPNE2-209ENST00000567011 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
CPNE2-209ENST00000567011 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
CPNE2-209ENST00000567011 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
CPNE2-209ENST00000567011 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
CPNE2-209ENST00000567011 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
CPNE2-209ENST00000567011 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
CPNE2-209ENST00000567011 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
CPNE2-209ENST00000567011 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
CPNE2-209ENST00000567011 CHL1O00533 1208 aa16.5■□□□□ 0.23
CPNE2-209ENST00000567011 ECE1P42892 770 aa16.5■□□□□ 0.23
CPNE2-209ENST00000567011 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
CPNE2-209ENST00000567011 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
CPNE2-209ENST00000567011 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
CPNE2-209ENST00000567011 EGFRP00533 1210 aa16.49■□□□□ 0.23
CPNE2-209ENST00000567011 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
CPNE2-209ENST00000567011 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
CPNE2-209ENST00000567011 PGAP2Q9UHJ9 254 aa16.49■□□□□ 0.23
CPNE2-209ENST00000567011 CNOT7Q9UIV1 285 aaKnown RBP16.49■□□□□ 0.23
CPNE2-209ENST00000567011 LAMB2P55268 1798 aa16.49■□□□□ 0.23
CPNE2-209ENST00000567011 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
CPNE2-209ENST00000567011 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
CPNE2-209ENST00000567011 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
CPNE2-209ENST00000567011 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
CPNE2-209ENST00000567011 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
CPNE2-209ENST00000567011 RIMBP2O15034 1052 aa16.47■□□□□ 0.23
CPNE2-209ENST00000567011 RALBP1Q15311 655 aa16.47■□□□□ 0.23
CPNE2-209ENST00000567011 SAMD7Q7Z3H4 446 aa16.47■□□□□ 0.23
CPNE2-209ENST00000567011 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
CPNE2-209ENST00000567011 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
CPNE2-209ENST00000567011 TAF1P21675 1872 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 PSMD14O00487 310 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 GPSM2P81274 684 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 TNIP1Q15025 636 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
CPNE2-209ENST00000567011 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
CPNE2-209ENST00000567011 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 MAP2K2P36507 400 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 TBC1D10BQ4KMP7 808 aaPredicted RBP16.45■□□□□ 0.22
CPNE2-209ENST00000567011 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 ANKRD36CQ5JPF3 1778 aa16.45■□□□□ 0.22
CPNE2-209ENST00000567011 CCDC85CA6NKD9 419 aa16.44■□□□□ 0.22
CPNE2-209ENST00000567011 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
CPNE2-209ENST00000567011 SF3B3Q15393 1217 aaKnown RBP16.44■□□□□ 0.22
CPNE2-209ENST00000567011 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
CPNE2-209ENST00000567011 ZC3H15Q8WU90 426 aaKnown RBP16.44■□□□□ 0.22
CPNE2-209ENST00000567011 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
CPNE2-209ENST00000567011 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
CPNE2-209ENST00000567011 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
CPNE2-209ENST00000567011 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
CPNE2-209ENST00000567011 H7C1D1 291 aa16.43■□□□□ 0.22
CPNE2-209ENST00000567011 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
CPNE2-209ENST00000567011 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
CPNE2-209ENST00000567011 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
CPNE2-209ENST00000567011 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
CPNE2-209ENST00000567011 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
CPNE2-209ENST00000567011 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
CPNE2-209ENST00000567011 ECE2O60344 883 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
CPNE2-209ENST00000567011 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
CPNE2-209ENST00000567011 ASTN2O75129 1339 aaPredicted RBP16.42■□□□□ 0.22
CPNE2-209ENST00000567011 BRPF1P55201 1214 aaPredicted RBP16.41■□□□□ 0.22
CPNE2-209ENST00000567011 HUNKP57058 714 aa16.41■□□□□ 0.22
CPNE2-209ENST00000567011 TBC1D16Q8TBP0 767 aa16.41■□□□□ 0.22
CPNE2-209ENST00000567011 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
CPNE2-209ENST00000567011 ELL2O00472 640 aaPredicted RBP16.4■□□□□ 0.22
CPNE2-209ENST00000567011 HOXB7P09629 217 aa16.4■□□□□ 0.22
CPNE2-209ENST00000567011 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
CPNE2-209ENST00000567011 KRT26Q7Z3Y9 468 aa16.4■□□□□ 0.22
CPNE2-209ENST00000567011 DPF2Q92785 391 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms