RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 VEGFBP49765 207 aa7.89□□□□□ -1.15
CNOT1-209ENST00000566240 SCARF1Q14162 830 aa7.89□□□□□ -1.15
CNOT1-209ENST00000566240 SLC16A10Q8TF71 515 aa7.89□□□□□ -1.15
CNOT1-209ENST00000566240 CRELD1Q96HD1 420 aa7.89□□□□□ -1.15
CNOT1-209ENST00000566240 CEP63Q96MT8 703 aa7.89□□□□□ -1.15
CNOT1-209ENST00000566240 FIGNL2A6NMB9 653 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 GIPC1O14908 333 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 PHACTR2O75167 634 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-209ENST00000566240 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CNOT1-209ENST00000566240 TYRO3Q06418 890 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 EPS8L3Q8TE67 593 aaKnown RBP7.88□□□□□ -1.15
CNOT1-209ENST00000566240 NLRP2Q9NX02 1062 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
CNOT1-209ENST00000566240 SOS2Q07890 1332 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-209ENST00000566240 XYLBO75191 536 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 PI16Q6UXB8 463 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 OSBPL7Q9BZF2 842 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 TGIF2Q9GZN2 237 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 CRISPLD1Q9H336 500 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 C12orf49Q9H741 205 aa7.87□□□□□ -1.15
CNOT1-209ENST00000566240 H3BM21 787 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 IRS1P35568 1242 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 SF3A1Q15459 793 aaKnown RBP7.86□□□□□ -1.15
CNOT1-209ENST00000566240 RUBCNLQ9H714 662 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 GPAMQ9HCL2 828 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 DYRK1BQ9Y463 629 aa7.86□□□□□ -1.15
CNOT1-209ENST00000566240 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 EGFRP00533 1210 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 F11P03951 625 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 NLRP8Q86W28 1048 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 NPAS3Q8IXF0 933 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 PGBD3Q8N328 593 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 IRF7Q92985 503 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 CCSER2Q9H7U1 834 aa7.85□□□□□ -1.15
CNOT1-209ENST00000566240 PPP1R1BQ9UD71 204 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-209ENST00000566240 POLR3DP05423 398 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-209ENST00000566240 NLRP13Q86W25 1043 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 C1orf127Q8N9H9 656 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 ZSCAN1Q8NBB4 408 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 ZCCHC2Q9C0B9 1178 aaKnown RBP7.84□□□□□ -1.15
CNOT1-209ENST00000566240 CHRDQ9H2X0 955 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 NPHS2Q9NP85 383 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 ABI2Q9NYB9 513 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-209ENST00000566240 CNTN3Q9P232 1028 aa7.84□□□□□ -1.15
CNOT1-209ENST00000566240 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-209ENST00000566240 USP31Q70CQ4 1352 aa7.84□□□□□ -1.16
CNOT1-209ENST00000566240 EREGO14944 169 aa7.83□□□□□ -1.16
CNOT1-209ENST00000566240 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
CNOT1-209ENST00000566240 TTC39BQ5VTQ0 682 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-209ENST00000566240 GALNT12Q8IXK2 581 aa7.83□□□□□ -1.16
CNOT1-209ENST00000566240 GAS2L1Q99501 681 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-209ENST00000566240 FAM8A1Q9UBU6 413 aa7.83□□□□□ -1.16
CNOT1-209ENST00000566240 FAM181BA6NEQ2 426 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 UBXN4Q92575 508 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 TINF2Q9BSI4 451 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 BCO2Q9BYV7 579 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 SRCIN1Q9C0H9 1055 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 ACBD3Q9H3P7 528 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 CAPN10Q9HC96 672 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 DNMT3LQ9UJW3 386 aa7.82□□□□□ -1.16
CNOT1-209ENST00000566240 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-209ENST00000566240 USP17L7P0C7H9 530 aa7.81□□□□□ -1.16
CNOT1-209ENST00000566240 CES1P23141 567 aa7.81□□□□□ -1.16
CNOT1-209ENST00000566240 KCNQ4P56696 695 aa7.81□□□□□ -1.16
CNOT1-209ENST00000566240 PTPN12Q05209 780 aaKnown RBP7.81□□□□□ -1.16
CNOT1-209ENST00000566240 TAF1CQ15572 869 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-209ENST00000566240 SLC43A3Q8NBI5 491 aa7.81□□□□□ -1.16
CNOT1-209ENST00000566240 DDX41Q9UJV9 622 aaKnown RBP7.81□□□□□ -1.16
CNOT1-209ENST00000566240 KCNH4Q9UQ05 1017 aa7.81□□□□□ -1.16
CNOT1-209ENST00000566240 SASH3O75995 380 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 ST13P50502 369 aaKnown RBP7.8□□□□□ -1.16
CNOT1-209ENST00000566240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.16
CNOT1-209ENST00000566240 ZNF394Q53GI3 561 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 MEI1Q5TIA1 1274 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 HS2ST1Q7LGA3 356 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 GGT7Q9UJ14 662 aa7.8□□□□□ -1.16
CNOT1-209ENST00000566240 SOBPA7XYQ1 873 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 TNNI2P48788 182 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 RACK1P63244 317 aaKnown RBP7.79□□□□□ -1.16
CNOT1-209ENST00000566240 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
CNOT1-209ENST00000566240 GNL2Q13823 731 aaKnown RBP7.79□□□□□ -1.16
CNOT1-209ENST00000566240 FIGNL1Q6PIW4 674 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 USP48Q86UV5 1035 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 TANGO6Q9C0B7 1094 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
CNOT1-209ENST00000566240 SENP3-EIF4A1A0A087X0R7 540 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 ATXN7O15265 892 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-209ENST00000566240 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-209ENST00000566240 FAM157BP0CG42 384 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 TARSP26639 723 aaKnown RBP7.78□□□□□ -1.16
CNOT1-209ENST00000566240 CCINQ13939 588 aa7.78□□□□□ -1.16
CNOT1-209ENST00000566240 GRM2Q14416 872 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms