RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
CDH13-207ENST00000565636 KIF13BQ9NQT8 1826 aa11.48□□□□□ -0.57
CDH13-207ENST00000565636 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 WNT7AO00755 349 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 FBLN1P23142 703 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 NLGN2Q8NFZ4 835 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
CDH13-207ENST00000565636 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
CDH13-207ENST00000565636 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
CDH13-207ENST00000565636 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
CDH13-207ENST00000565636 CRIPAKQ8N1N5 446 aa11.46□□□□□ -0.57
CDH13-207ENST00000565636 PIGBQ92521 554 aa11.46□□□□□ -0.57
CDH13-207ENST00000565636 AK7Q96M32 723 aa11.46□□□□□ -0.57
CDH13-207ENST00000565636 CARD14Q9BXL6 1004 aa11.46□□□□□ -0.57
CDH13-207ENST00000565636 LOC102724428A0A0B4J2F2 783 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 AXIN1O15169 862 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 AVPP01185 164 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH13-207ENST00000565636 KCNQ4P56696 695 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 SIK1P57059 783 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 TGFB2P61812 414 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
CDH13-207ENST00000565636 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
CDH13-207ENST00000565636 ST8SIA5O15466 376 aa11.44□□□□□ -0.58
CDH13-207ENST00000565636 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
CDH13-207ENST00000565636 SNIP1Q8TAD8 396 aaKnown RBP11.44□□□□□ -0.58
CDH13-207ENST00000565636 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
CDH13-207ENST00000565636 TTLL12Q14166 644 aaPredicted RBP11.43□□□□□ -0.58
CDH13-207ENST00000565636 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
CDH13-207ENST00000565636 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
CDH13-207ENST00000565636 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
CDH13-207ENST00000565636 HLA-CQ95604 372 aa11.43□□□□□ -0.58
CDH13-207ENST00000565636 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
CDH13-207ENST00000565636 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
CDH13-207ENST00000565636 ADCY9O60503 1353 aa11.42□□□□□ -0.58
CDH13-207ENST00000565636 PHKG2P15735 406 aa11.42□□□□□ -0.58
CDH13-207ENST00000565636 JUNDP17535 347 aa11.42□□□□□ -0.58
CDH13-207ENST00000565636 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
CDH13-207ENST00000565636 FDX1P10109 184 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
CDH13-207ENST00000565636 WNT7BP56706 349 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
CDH13-207ENST00000565636 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
CDH13-207ENST00000565636 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
CDH13-207ENST00000565636 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
CDH13-207ENST00000565636 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
CDH13-207ENST00000565636 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
CDH13-207ENST00000565636 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
CDH13-207ENST00000565636 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.59
CDH13-207ENST00000565636 IGSF1Q8N6C5 1336 aa11.39□□□□□ -0.59
CDH13-207ENST00000565636 HSPA6P17066 643 aa11.39□□□□□ -0.59
CDH13-207ENST00000565636 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
CDH13-207ENST00000565636 GUCA2AQ02747 115 aa11.39□□□□□ -0.59
CDH13-207ENST00000565636 MRGPRX2Q96LB1 330 aa11.39□□□□□ -0.59
CDH13-207ENST00000565636 ATG3Q9NT62 314 aa11.39□□□□□ -0.59
CDH13-207ENST00000565636 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
CDH13-207ENST00000565636 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
CDH13-207ENST00000565636 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
CDH13-207ENST00000565636 POTECB2RU33 542 aa11.37□□□□□ -0.59
CDH13-207ENST00000565636 ZMYND10O75800 440 aa11.37□□□□□ -0.59
CDH13-207ENST00000565636 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
CDH13-207ENST00000565636 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
CDH13-207ENST00000565636 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 ITPK1Q13572 414 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 AMHR2Q16671 573 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
CDH13-207ENST00000565636 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 KDRP35968 1356 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
CDH13-207ENST00000565636 TOMM70O94826 608 aa11.35□□□□□ -0.59
CDH13-207ENST00000565636 MMP10P09238 476 aa11.35□□□□□ -0.59
CDH13-207ENST00000565636 RFC4P35249 363 aa11.35□□□□□ -0.59
CDH13-207ENST00000565636 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
CDH13-207ENST00000565636 SBF1O95248 1867 aa11.35□□□□□ -0.59
CDH13-207ENST00000565636 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
CDH13-207ENST00000565636 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 MS4A1P11836 297 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 SMPD1P17405 629 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 CABP4P57796 275 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH13-207ENST00000565636 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
CDH13-207ENST00000565636 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 PARP3Q9Y6F1 533 aa11.34□□□□□ -0.59
CDH13-207ENST00000565636 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
CDH13-207ENST00000565636 GYS1P13807 737 aa11.33□□□□□ -0.6
CDH13-207ENST00000565636 MTHFSP49914 203 aa11.33□□□□□ -0.6
CDH13-207ENST00000565636 C10orf71Q711Q0 1435 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms