RNA–Protein interactions for RNA: ENST00000565318.5

CPT1A-208, Transcript of carnitine palmitoyltransferase 1A, human

TSL 5

Gene CPT1A, Length 511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPT1A-208	ENST00000565318	CHRNA5	P30532	468 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	IRX6	P78412	446 aa	Predicted RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	ATP8B2	P98198	1209 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	LMBR1L	Q6UX01	489 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	C2CD5	Q86YS7	1000 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	ANKRD44	Q8N8A2	993 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	EXOC6	Q8TAG9	804 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	CHMP4B	Q9H444	224 aa	Known RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	BICC1	Q9H694	974 aa	Known RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	PDZRN3	Q9UPQ7	1066 aa		11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	LRRFIP2	Q9Y608	721 aa	Known RBP	11.64	□□□□□ -0.55
CPT1A-208	ENST00000565318	CTSW	P56202	376 aa		11.63	□□□□□ -0.55
CPT1A-208	ENST00000565318	ABCC12	Q96J65	1359 aa		11.63	□□□□□ -0.55
CPT1A-208	ENST00000565318	PXDNL	A1KZ92	1463 aa		11.63	□□□□□ -0.55
CPT1A-208	ENST00000565318	NPR1	P16066	1061 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	MTX1	Q13505	466 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	CCDC152	Q4G0S7	254 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	SIRT2	Q8IXJ6	389 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	MASTL	Q96GX5	879 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	CRAMP1	Q96RY5	1269 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	GREM2	Q9H772	168 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	SEC31B	Q9NQW1	1179 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	CASZ1	Q86V15	1759 aa		11.62	□□□□□ -0.55
CPT1A-208	ENST00000565318	QSER1	Q2KHR3	1735 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	BBOX1	O75936	387 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	ALDH1B1	P30837	517 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	RFX5	P48382	616 aa	Predicted RBP	11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	RPS8	P62241	208 aa	Known RBP	11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	TPRN	Q4KMQ1	711 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	STYK1	Q6J9G0	422 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	NLGN2	Q8NFZ4	835 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	RBM17	Q96I25	401 aa	Known RBP	11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	C1orf115	Q9H7X2	142 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	PCDHB15	Q9Y5E8	787 aa		11.61	□□□□□ -0.55
CPT1A-208	ENST00000565318	ITGA6	P23229	1130 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	AAMP	Q13685	434 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	DDX46	Q7L014	1031 aa	Known RBP	11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	KLHL34	Q8N239	644 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	C7orf43	Q8WVR3	580 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	RPGR	Q92834	1020 aa	Known RBP	11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	CELF1	Q92879	486 aa	Known RBP	11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	PIM2	Q9P1W9	311 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	C4A	P0C0L4	1744 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	RIC1	Q4ADV7	1423 aa		11.6	□□□□□ -0.55
CPT1A-208	ENST00000565318	TUBGCP6	Q96RT7	1819 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	PNMA6E	A0A0J9YXQ4	647 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	IFIT5	Q13325	482 aa	Known RBP	11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	POLA2	Q14181	598 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	CCDC57	Q2TAC2	916 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	CEP85	Q6P2H3	762 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	SSH3	Q8TE77	659 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	BBX	Q8WY36	941 aa	Predicted RBP	11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	CNKSR1	Q969H4	720 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	ZNF594	Q96JF6	807 aa	Predicted RBP	11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	C10orf71	Q711Q0	1435 aa		11.59	□□□□□ -0.55
CPT1A-208	ENST00000565318	ANKRD18B	A2A2Z9	1011 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	SRGAP3	O43295	1099 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	PTPN12	Q05209	780 aa	Known RBP	11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	GRAP	Q13588	217 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	FAM161A	Q3B820	660 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	TTLL6	Q8N841	843 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	KLHDC4	Q8TBB5	520 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	GRAPL	Q8TC17	118 aa	Predicted RBP	11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	COPRS	Q9NQ92	184 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	NUP98	P52948	1817 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	SRCAP	Q6ZRS2	3230 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	CACNA1F	O60840	1977 aa		11.58	□□□□□ -0.56
CPT1A-208	ENST00000565318	RTL9	Q8NET4	1388 aa		11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	SCN7A	Q01118	1682 aa		11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	DALRD3	Q5D0E6	543 aa	Known RBP	11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	SP8	Q8IXZ3	490 aa		11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	BSDC1	Q9NW68	430 aa	Predicted RBP	11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	CHMP3	Q9Y3E7	222 aa		11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	RIPOR2	Q9Y4F9	1068 aa		11.57	□□□□□ -0.56
CPT1A-208	ENST00000565318	LDHAL6A	Q6ZMR3	332 aa		11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	ANKRD18A	Q8IVF6	992 aa		11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	CDC5L	Q99459	802 aa	Known RBP	11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	PUS3	Q9BZE2	481 aa	Known RBP	11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	NOP58	Q9Y2X3	529 aa	Known RBP	11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	ATP6V0A2	Q9Y487	856 aa		11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	BCOR	Q6W2J9	1755 aa		11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	ARFGEF2	Q9Y6D5	1785 aa		11.56	□□□□□ -0.56
CPT1A-208	ENST00000565318	COL24A1	Q17RW2	1714 aa		11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	IGHD	P01880	384 aa		11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	LRRC24	Q50LG9	513 aa		11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	PRPF40B	Q6NWY9	871 aa	Known RBP	11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	ATG9A	Q7Z3C6	839 aa		11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	MINPP1	Q9UNW1	487 aa		11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	PA2G4	Q9UQ80	394 aa	Known RBP	11.55	□□□□□ -0.56
CPT1A-208	ENST00000565318	EYA2	O00167	538 aa		11.54	□□□□□ -0.56
CPT1A-208	ENST00000565318	C21orf2	O43822	256 aa		11.54	□□□□□ -0.56
CPT1A-208	ENST00000565318	SURF6	O75683	361 aa	Known RBP	11.54	□□□□□ -0.56
CPT1A-208	ENST00000565318	IGHMBP2	P38935	993 aa	Known RBP	11.54	□□□□□ -0.56
CPT1A-208	ENST00000565318	OLFM4	Q6UX06	510 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms