RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 DNAAF4Q8WXU2 420 aa24.11■■□□□ 1.45
NEIL1-205ENST00000564738 PSMD1Q99460 953 aa24.11■■□□□ 1.45
NEIL1-205ENST00000564738 TMX4Q9H1E5 349 aaPredicted RBP24.11■■□□□ 1.45
NEIL1-205ENST00000564738 LAMB2P55268 1798 aa24.11■■□□□ 1.45
NEIL1-205ENST00000564738 SEC31BQ9NQW1 1179 aa24.1■■□□□ 1.45
NEIL1-205ENST00000564738 TAF1P21675 1872 aa24.09■■□□□ 1.45
NEIL1-205ENST00000564738 POTECB2RU33 542 aa24.09■■□□□ 1.45
NEIL1-205ENST00000564738 PDE8AO60658 829 aa24.09■■□□□ 1.45
NEIL1-205ENST00000564738 DDX60Q8IY21 1712 aaKnown RBP24.09■■□□□ 1.45
NEIL1-205ENST00000564738 C16orf71Q8IYS4 520 aaPredicted RBP24.08■■□□□ 1.45
NEIL1-205ENST00000564738 TOMM70O94826 608 aa24.07■■□□□ 1.44
NEIL1-205ENST00000564738 MPNDQ8N594 471 aa24.07■■□□□ 1.44
NEIL1-205ENST00000564738 ZNF541Q9H0D2 1346 aa24.07■■□□□ 1.44
NEIL1-205ENST00000564738 TIAM2Q8IVF5 1701 aa24.07■■□□□ 1.44
NEIL1-205ENST00000564738 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
NEIL1-205ENST00000564738 DPP8Q6V1X1 898 aaPredicted RBP24.06■■□□□ 1.44
NEIL1-205ENST00000564738 LARGE2Q8N3Y3 721 aa24.06■■□□□ 1.44
NEIL1-205ENST00000564738 DICER1Q9UPY3 1922 aaKnown RBP24.06■■□□□ 1.44
NEIL1-205ENST00000564738 H7C1W4 665 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 RPS8P62241 208 aaKnown RBP24.05■■□□□ 1.44
NEIL1-205ENST00000564738 GCKRQ14397 625 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 AOC3Q16853 763 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 GRIPAP1Q4V328 841 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 UBE3BQ7Z3V4 1068 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 JDP2Q8WYK2 163 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 CDHR2Q9BYE9 1310 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 COL4A1P02462 1669 aa24.05■■□□□ 1.44
NEIL1-205ENST00000564738 PPIP5K2O43314 1243 aa24.04■■□□□ 1.44
NEIL1-205ENST00000564738 HSP90B1P14625 803 aaKnown RBP24.04■■□□□ 1.44
NEIL1-205ENST00000564738 CCDC152Q4G0S7 254 aa24.04■■□□□ 1.44
NEIL1-205ENST00000564738 MRPL50Q8N5N7 158 aaKnown RBP24.04■■□□□ 1.44
NEIL1-205ENST00000564738 FZD9O00144 591 aa24.03■■□□□ 1.44
NEIL1-205ENST00000564738 LINS1Q8NG48 757 aa24.03■■□□□ 1.44
NEIL1-205ENST00000564738 GPSM2P81274 684 aa24.02■■□□□ 1.44
NEIL1-205ENST00000564738 BEND3Q5T5X7 828 aa24.02■■□□□ 1.44
NEIL1-205ENST00000564738 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
NEIL1-205ENST00000564738 BCL2L13Q9BXK5 485 aa24.02■■□□□ 1.44
NEIL1-205ENST00000564738 NSFL1CQ9UNZ2 370 aaKnown RBP24.02■■□□□ 1.44
NEIL1-205ENST00000564738 COL4A5P29400 1685 aa24.02■■□□□ 1.44
NEIL1-205ENST00000564738 CTSWP56202 376 aa24.01■■□□□ 1.43
NEIL1-205ENST00000564738 SLC4A10Q6U841 1118 aa24.01■■□□□ 1.43
NEIL1-205ENST00000564738 TTLL11Q8NHH1 800 aa24.01■■□□□ 1.43
NEIL1-205ENST00000564738 RBM46Q8TBY0 533 aaKnown RBP24.01■■□□□ 1.43
NEIL1-205ENST00000564738 SSH1Q8WYL5 1049 aa24.01■■□□□ 1.43
NEIL1-205ENST00000564738 RTFDC1Q9BY42 306 aaPredicted RBP24.01■■□□□ 1.43
NEIL1-205ENST00000564738 CASP7P55210 303 aa24■■□□□ 1.43
NEIL1-205ENST00000564738 TMC4Q7Z404 712 aa24■■□□□ 1.43
NEIL1-205ENST00000564738 SUPT20HQ8NEM7 779 aa24■■□□□ 1.43
NEIL1-205ENST00000564738 GJA3Q9Y6H8 435 aa24■■□□□ 1.43
NEIL1-205ENST00000564738 EIF6P56537 245 aaKnown RBP23.99■■□□□ 1.43
NEIL1-205ENST00000564738 NIM1KQ8IY84 436 aa23.99■■□□□ 1.43
NEIL1-205ENST00000564738 GPR101Q96P66 508 aaPredicted RBP23.99■■□□□ 1.43
NEIL1-205ENST00000564738 GREM2Q9H772 168 aa23.99■■□□□ 1.43
NEIL1-205ENST00000564738 RIMBP2O15034 1052 aa23.98■■□□□ 1.43
NEIL1-205ENST00000564738 POLLQ9UGP5 575 aa23.98■■□□□ 1.43
NEIL1-205ENST00000564738 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
NEIL1-205ENST00000564738 C6orf229H3BNL8 230 aa23.97■■□□□ 1.43
NEIL1-205ENST00000564738 HSPA6P17066 643 aa23.97■■□□□ 1.43
NEIL1-205ENST00000564738 ANKRD18AQ8IVF6 992 aa23.97■■□□□ 1.43
NEIL1-205ENST00000564738 POTEIP0CG38 1075 aa23.96■■□□□ 1.43
NEIL1-205ENST00000564738 POTEJP0CG39 1038 aa23.96■■□□□ 1.43
NEIL1-205ENST00000564738 WDR90Q96KV7 1748 aa23.96■■□□□ 1.43
NEIL1-205ENST00000564738 KIAA2012Q0VF49 1180 aa23.95■■□□□ 1.42
NEIL1-205ENST00000564738 L3MBTL3Q96JM7 780 aaPredicted RBP23.95■■□□□ 1.42
NEIL1-205ENST00000564738 PLA2G12BQ9BX93 195 aa23.95■■□□□ 1.42
NEIL1-205ENST00000564738 VPS33BQ9H267 617 aa23.95■■□□□ 1.42
NEIL1-205ENST00000564738 WASHC4Q2M389 1173 aa23.94■■□□□ 1.42
NEIL1-205ENST00000564738 TBC1D16Q8TBP0 767 aa23.94■■□□□ 1.42
NEIL1-205ENST00000564738 ZNRF3Q9ULT6 936 aa23.94■■□□□ 1.42
NEIL1-205ENST00000564738 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
NEIL1-205ENST00000564738 CXCL9Q07325 125 aa23.93■■□□□ 1.42
NEIL1-205ENST00000564738 GPC2Q8N158 579 aa23.93■■□□□ 1.42
NEIL1-205ENST00000564738 SMC1BQ8NDV3 1235 aa23.93■■□□□ 1.42
NEIL1-205ENST00000564738 CDC5LQ99459 802 aaKnown RBP23.93■■□□□ 1.42
NEIL1-205ENST00000564738 SRCIN1Q9C0H9 1055 aa23.93■■□□□ 1.42
NEIL1-205ENST00000564738 TAF1DQ9H5J8 278 aaPredicted RBP23.93■■□□□ 1.42
NEIL1-205ENST00000564738 ANKIB1Q9P2G1 1089 aa23.93■■□□□ 1.42
NEIL1-205ENST00000564738 CSF1RP07333 972 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 FSTL1Q12841 308 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 DOK7Q18PE1 504 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 FAM161AQ3B820 660 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 EPHA10Q5JZY3 1008 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 HACL1Q9UJ83 578 aa23.92■■□□□ 1.42
NEIL1-205ENST00000564738 IQCA1LA6NCM1 817 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 WTIPA6NIX2 430 aaPredicted RBP23.91■■□□□ 1.42
NEIL1-205ENST00000564738 YDJCA8MPS7 323 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 ALDH1L1O75891 902 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 RAD17O75943 681 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 ITGA6P23229 1130 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 FOXO4P98177 505 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
NEIL1-205ENST00000564738 DBNDD1Q9H9R9 158 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 C9orf78Q9NZ63 289 aaPredicted RBP23.91■■□□□ 1.42
NEIL1-205ENST00000564738 DUOX1Q9NRD9 1551 aa23.91■■□□□ 1.42
NEIL1-205ENST00000564738 GRM8O00222 908 aa23.9■■□□□ 1.42
NEIL1-205ENST00000564738 UFL1O94874 794 aa23.9■■□□□ 1.42
NEIL1-205ENST00000564738 HTRA3P83110 453 aa23.9■■□□□ 1.42
NEIL1-205ENST00000564738 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
NEIL1-205ENST00000564738 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms