RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MCM2P49736 904 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
HERPUD1-209ENST00000564678 PI4K2BQ8TCG2 481 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 RILPL2Q969X0 211 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 CARD10Q9BWT7 1032 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 IL1RAPL2Q9NP60 686 aa8.81□□□□□ -1
HERPUD1-209ENST00000564678 PARP4Q9UKK3 1724 aaKnown RBP8.81□□□□□ -1
HERPUD1-209ENST00000564678 GLRX3O76003 335 aaKnown RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 CD2BP2O95400 341 aaKnown RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 TCF3P15923 654 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 RAB3GAP1Q15042 981 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 COPS6Q7L5N1 327 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 CNTROBQ8N137 903 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 DRC1Q96MC2 740 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 COL15A1P39059 1388 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 IGKV5-2P06315 115 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 ZNF16P17020 682 aaPredicted RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 AIMP1Q12904 312 aaKnown RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 DNAJC14Q6Y2X3 702 aaPredicted RBP8.8□□□□□ -1
HERPUD1-209ENST00000564678 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 XAGE3Q8WTP9 111 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 GPATCH3Q96I76 525 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 GBP4Q96PP9 640 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 USP16Q9Y5T5 823 aa8.8□□□□□ -1
HERPUD1-209ENST00000564678 IL2RBP14784 551 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
HERPUD1-209ENST00000564678 OS9Q13438 667 aaPredicted RBP8.79□□□□□ -1
HERPUD1-209ENST00000564678 GCKRQ14397 625 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 CLEC17AQ6ZS10 378 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 NUTM1Q86Y26 1132 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 COL5A2P05997 1499 aaPredicted RBP8.79□□□□□ -1
HERPUD1-209ENST00000564678 PRR29P0C7W0 189 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 NUCB2P80303 420 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -13e-10■■□□□ 13.1
HERPUD1-209ENST00000564678 TSHZ3Q63HK5 1081 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 BANK1Q8NDB2 785 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 KAZALD1Q96I82 304 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 SUCLG2Q96I99 432 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 PPP1R1BQ9UD71 204 aaPredicted RBP8.79□□□□□ -1
HERPUD1-209ENST00000564678 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 C5P01031 1676 aa8.79□□□□□ -1
HERPUD1-209ENST00000564678 ZNF335Q9H4Z2 1342 aaPredicted RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 MYL6BP14649 208 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 UNC5CLQ8IV45 518 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 PLBD2Q8NHP8 589 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 SREK1Q8WXA9 508 aaKnown RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 BICC1Q9H694 974 aaKnown RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 ECHDC1Q9NTX5 307 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 AK9Q5TCS8 1911 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 IFIT2P09913 472 aaKnown RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 SKOR2Q2VWA4 1001 aaPredicted RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 RUFY2Q8WXA3 655 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 TNPO1Q92973 898 aaKnown RBP8.78□□□□□ -1
HERPUD1-209ENST00000564678 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
HERPUD1-209ENST00000564678 SGSM2O43147 1006 aa8.77□□□□□ -1.01
HERPUD1-209ENST00000564678 NLRP7Q8WX94 980 aa8.77□□□□□ -1.01
HERPUD1-209ENST00000564678 MYD88Q99836 296 aa8.77□□□□□ -1.01
HERPUD1-209ENST00000564678 HIP1O00291 1037 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 HSPA4P34932 840 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 EVA1CP58658 441 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 DSG2Q14126 1118 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 RABL6Q3YEC7 729 aaPredicted RBP8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 EVI5LQ96CN4 794 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 LAMB4A4D0S4 1761 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 SASH1O94885 1247 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 NEK4P51957 841 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 NHSL1Q5SYE7 1610 aa8.76□□□□□ -1.01
HERPUD1-209ENST00000564678 GOLGA6L22H0YM25 854 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 PTGDRQ13258 359 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 KIAA1211Q6ZU35 1233 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 TEX13AQ9BXU3 409 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 GPHNQ9NQX3 736 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 RAD50Q92878 1312 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 CUL4AQ13619 759 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 L1TD1Q5T7N2 865 aaKnown RBP8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 AACSQ86V21 672 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 ISY1Q9ULR0 285 aaKnown RBP8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 UBR2Q8IWV8 1755 aa8.75□□□□□ -1.01
HERPUD1-209ENST00000564678 GLI3P10071 1580 aa8.74□□□□□ -1.01
HERPUD1-209ENST00000564678 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-209ENST00000564678 CLCN1P35523 988 aa8.74□□□□□ -1.01
HERPUD1-209ENST00000564678 EAF2Q96CJ1 260 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms