RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
CTU2-205ENST00000564584 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
CTU2-205ENST00000564584 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
CTU2-205ENST00000564584 DDX21Q9NR30 783 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTU2-205ENST00000564584 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
CTU2-205ENST00000564584 BBOX1O75936 387 aa17.88■□□□□ 0.45
CTU2-205ENST00000564584 TCIRG1Q13488 830 aa17.88■□□□□ 0.45
CTU2-205ENST00000564584 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
CTU2-205ENST00000564584 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
CTU2-205ENST00000564584 MAP1SQ66K74 1059 aaPredicted RBP17.88■□□□□ 0.45
CTU2-205ENST00000564584 CNTNAP1P78357 1384 aa17.88■□□□□ 0.45
CTU2-205ENST00000564584 VAMP4O75379 141 aa17.87■□□□□ 0.45
CTU2-205ENST00000564584 LMOD1P29536 600 aaPredicted RBP17.87■□□□□ 0.45
CTU2-205ENST00000564584 NIM1KQ8IY84 436 aa17.87■□□□□ 0.45
CTU2-205ENST00000564584 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
CTU2-205ENST00000564584 VPS33BQ9H267 617 aa17.87■□□□□ 0.45
CTU2-205ENST00000564584 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
CTU2-205ENST00000564584 TRMT112Q9UI30 125 aaKnown RBP17.87■□□□□ 0.45
CTU2-205ENST00000564584 PPIP5K2O43314 1243 aa17.86■□□□□ 0.45
CTU2-205ENST00000564584 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
CTU2-205ENST00000564584 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
CTU2-205ENST00000564584 ABCC4O15439 1325 aa17.86■□□□□ 0.45
CTU2-205ENST00000564584 EPS15P42566 896 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 VEGFBP49765 207 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 SCNN1DP51172 638 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 AOC3Q16853 763 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 SP8Q8IXZ3 490 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
CTU2-205ENST00000564584 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
CTU2-205ENST00000564584 FOXN1O15353 648 aa17.84■□□□□ 0.45
CTU2-205ENST00000564584 DDX46Q7L014 1031 aaKnown RBP17.84■□□□□ 0.45
CTU2-205ENST00000564584 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
CTU2-205ENST00000564584 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
CTU2-205ENST00000564584 CHPF2Q9P2E5 772 aa17.84■□□□□ 0.45
CTU2-205ENST00000564584 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.44
CTU2-205ENST00000564584 DPP8Q6V1X1 898 aaPredicted RBP17.83■□□□□ 0.44
CTU2-205ENST00000564584 USP50Q70EL3 339 aaPredicted RBP17.83■□□□□ 0.44
CTU2-205ENST00000564584 ZNRF3Q9ULT6 936 aa17.83■□□□□ 0.44
CTU2-205ENST00000564584 SCN4AP35499 1836 aa17.83■□□□□ 0.44
CTU2-205ENST00000564584 COL4A5P29400 1685 aa17.83■□□□□ 0.44
CTU2-205ENST00000564584 NUP98P52948 1817 aa17.82■□□□□ 0.44
CTU2-205ENST00000564584 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
CTU2-205ENST00000564584 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
CTU2-205ENST00000564584 MPNDQ8N594 471 aa17.82■□□□□ 0.44
CTU2-205ENST00000564584 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
CTU2-205ENST00000564584 RASSF10A6NK89 507 aa17.81■□□□□ 0.44
CTU2-205ENST00000564584 CXCL9Q07325 125 aa17.81■□□□□ 0.44
CTU2-205ENST00000564584 GRAPQ13588 217 aa17.81■□□□□ 0.44
CTU2-205ENST00000564584 GRAPLQ8TC17 118 aaPredicted RBP17.81■□□□□ 0.44
CTU2-205ENST00000564584 KIAA2012Q0VF49 1180 aa17.8■□□□□ 0.44
CTU2-205ENST00000564584 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
CTU2-205ENST00000564584 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
CTU2-205ENST00000564584 ABT1Q9ULW3 272 aaKnown RBP17.8■□□□□ 0.44
CTU2-205ENST00000564584 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
CTU2-205ENST00000564584 AIDAQ96BJ3 306 aa17.79■□□□□ 0.44
CTU2-205ENST00000564584 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
CTU2-205ENST00000564584 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
CTU2-205ENST00000564584 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
CTU2-205ENST00000564584 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
CTU2-205ENST00000564584 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
CTU2-205ENST00000564584 CIAPIN1Q6FI81 312 aa17.78■□□□□ 0.44
CTU2-205ENST00000564584 FAM89AQ96GI7 184 aa17.78■□□□□ 0.44
CTU2-205ENST00000564584 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
CTU2-205ENST00000564584 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
CTU2-205ENST00000564584 GMPSP49915 693 aaPredicted RBP17.77■□□□□ 0.44
CTU2-205ENST00000564584 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
CTU2-205ENST00000564584 FMR1Q06787 632 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTU2-205ENST00000564584 TNIP1Q15025 636 aa17.77■□□□□ 0.44
CTU2-205ENST00000564584 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
CTU2-205ENST00000564584 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.44
CTU2-205ENST00000564584 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
CTU2-205ENST00000564584 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
CTU2-205ENST00000564584 RAD17O75943 681 aa17.76■□□□□ 0.43
CTU2-205ENST00000564584 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
CTU2-205ENST00000564584 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
CTU2-205ENST00000564584 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
CTU2-205ENST00000564584 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
CTU2-205ENST00000564584 CACNA1FO60840 1977 aa17.75■□□□□ 0.43
CTU2-205ENST00000564584 TRAF5O00463 557 aa17.75■□□□□ 0.43
CTU2-205ENST00000564584 CST9Q5W186 159 aa17.75■□□□□ 0.43
CTU2-205ENST00000564584 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
CTU2-205ENST00000564584 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
CTU2-205ENST00000564584 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
CTU2-205ENST00000564584 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
CTU2-205ENST00000564584 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
CTU2-205ENST00000564584 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
CTU2-205ENST00000564584 ABHD8Q96I13 439 aa17.74■□□□□ 0.43
CTU2-205ENST00000564584 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
CTU2-205ENST00000564584 PTPRCP08575 1304 aa17.73■□□□□ 0.43
CTU2-205ENST00000564584 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
CTU2-205ENST00000564584 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
CTU2-205ENST00000564584 FLIIQ13045 1269 aa17.73■□□□□ 0.43
CTU2-205ENST00000564584 WASHC4Q2M389 1173 aa17.73■□□□□ 0.43
CTU2-205ENST00000564584 PGAP2Q9UHJ9 254 aa17.73■□□□□ 0.43
CTU2-205ENST00000564584 RCAN3Q9UKA8 241 aa17.73■□□□□ 0.43
CTU2-205ENST00000564584 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
CTU2-205ENST00000564584 LTBP1Q14766 1721 aa17.72■□□□□ 0.43
CTU2-205ENST00000564584 YDJCA8MPS7 323 aa17.72■□□□□ 0.43
CTU2-205ENST00000564584 ECE1P42892 770 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms