RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 NBPF20Q3BBV1 942 aa7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 NGDNQ8NEJ9 315 aaKnown RBP7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 PIK3C2GO75747 1445 aa7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 ADGRB2O60241 1585 aa7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 ABCA3Q99758 1704 aa7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 TNS1Q9HBL0 1735 aaKnown RBP7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 RGPD8O14715 1765 aaPredicted RBP7.66□□□□□ -1.18
TUBGCP4-209ENST00000564511 ESPNB1AK53 854 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 ERVH48-1M5A8F1 160 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 LILRA1O75019 489 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 RELBQ01201 579 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 PTSQ03393 145 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 SPATA31E1Q6ZUB1 1445 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 KIAA0232Q92628 1395 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 NINLQ9Y2I6 1382 aa7.65□□□□□ -1.18
TUBGCP4-209ENST00000564511 THSD7AQ9UPZ6 1657 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 ANKARQ7Z5J8 1434 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 CTSOP43234 321 aaPredicted RBP7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 TRAK1Q9UPV9 953 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 IFT172Q9UG01 1749 aa7.64□□□□□ -1.19
TUBGCP4-209ENST00000564511 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 COL13A1Q5TAT6 717 aaPredicted RBP7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 KDF1Q8NAX2 398 aaPredicted RBP7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 INSM2Q96T92 566 aaPredicted RBP7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 MPHOSPH9Q99550 1183 aa7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 ZNF395Q9H8N7 513 aaPredicted RBP7.63□□□□□ -1.19
TUBGCP4-209ENST00000564511 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 ZBTB7AO95365 584 aa7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 FBXO45P0C2W1 286 aa7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 LARP1Q6PKG0 1096 aaKnown RBP7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 TCP11L2Q8N4U5 519 aa7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 PDGFDQ9GZP0 370 aaPredicted RBP7.62□□□□□ -1.19
TUBGCP4-209ENST00000564511 SLC35F4A4IF30 521 aa7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 FAM181BA6NEQ2 426 aa7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 PLSCR1O15162 318 aa7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 ADH1AP07327 375 aa7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 TRPM3Q9HCF6 1732 aaPredicted RBP7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 SSH2Q76I76 1423 aa7.61□□□□□ -1.19
TUBGCP4-209ENST00000564511 ALS2Q96Q42 1657 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 CAMTA1Q9Y6Y1 1673 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 EIF3AQ14152 1382 aaKnown RBP7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 PTGIRP43119 386 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 BANK1Q8NDB2 785 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 PCDHB9Q9Y5E1 797 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 NUP188Q5SRE5 1749 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 RREB1Q92766 1687 aa7.6□□□□□ -1.19
TUBGCP4-209ENST00000564511 ABTB2Q8N961 1025 aa7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 RNF217Q8TC41 542 aa7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 NUDT16Q96DE0 195 aaKnown RBP7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 SYT17Q9BSW7 474 aa7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 FHDC1Q9C0D6 1143 aaPredicted RBP7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 CYLDQ9NQC7 956 aa7.59□□□□□ -1.19
TUBGCP4-209ENST00000564511 DLC1Q96QB1 1528 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 TULP4Q9NRJ4 1543 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 ZBTB7CA1YPR0 619 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 GPR37L1O60883 481 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 KRT76Q01546 638 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 DDB1Q16531 1140 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 TPRNQ4KMQ1 711 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 PTF1AQ7RTS3 328 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 MTMR14Q8NCE2 650 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 SNRKQ9NRH2 765 aa7.58□□□□□ -1.2
TUBGCP4-209ENST00000564511 GOLGB1Q14789 3259 aaKnown RBP7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 STK32BQ9NY57 414 aa7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 OVOS2A0A0G2JMS6 1433 aa7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 OVOS2A0A0J9YW53 1432 aa7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 OVOS2Q6IE36 1432 aa7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 NRKQ7Z2Y5 1582 aa7.57□□□□□ -1.2
TUBGCP4-209ENST00000564511 ACEP12821 1306 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 CRYBG1Q9Y4K1 1723 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 GCP02774 474 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 NR1H3Q13133 447 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 SLC15A2Q16348 729 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 NLRP13Q86W25 1043 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 CNTNAP3BQ96NU0 1288 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 CDK19Q9BWU1 502 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 CPDO75976 1380 aa7.56□□□□□ -1.2
TUBGCP4-209ENST00000564511 ITGA6P23229 1130 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 GPR162Q16538 588 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 TXNRD1Q16881 649 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 TOM1L2Q6ZVM7 507 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 ARXQ96QS3 562 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 ATP7BP35670 1465 aa7.55□□□□□ -1.2
TUBGCP4-209ENST00000564511 CRB1P82279 1406 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms