RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 IL13P35225 146 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 ERCC6LQ2NKX8 1250 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 UTP14CQ5TAP6 766 aaKnown RBP14.59□□□□□ -0.07
COMMD4-209ENST00000564068 UNC5CLQ8IV45 518 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 MYD88Q99836 296 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 GBP3Q9H0R5 595 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 HMG20BQ9P0W2 317 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 TTC6Q86TZ1 520 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 ZNHIT6Q9NWK9 470 aaKnown RBP14.59□□□□□ -0.07
COMMD4-209ENST00000564068 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
COMMD4-209ENST00000564068 IPO4Q8TEX9 1081 aaKnown RBP14.59□□□□□ -0.07
COMMD4-209ENST00000564068 CLSTN2Q9H4D0 955 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
COMMD4-209ENST00000564068 CHL1O00533 1208 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.07
COMMD4-209ENST00000564068 SNRKQ9NRH2 765 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 MTMR6Q9Y217 621 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 NEO1Q92859 1461 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 ACEP12821 1306 aa14.58□□□□□ -0.07
COMMD4-209ENST00000564068 SYKP43405 635 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 CCDC144CPQ8IYA2 1237 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 KARSQ15046 597 aaKnown RBP14.58□□□□□ -0.08
COMMD4-209ENST00000564068 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-209ENST00000564068 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 FAM227BQ96M60 508 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 ME3Q16798 604 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 BRMS1Q9HCU9 246 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 ATP7AQ04656 1500 aa14.58□□□□□ -0.08
COMMD4-209ENST00000564068 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 CDKL5O76039 1030 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 IFIT1P09914 478 aaKnown RBP14.57□□□□□ -0.08
COMMD4-209ENST00000564068 EVCP57679 992 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 KRBA2Q6ZNG9 492 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 MAGEC2Q9UBF1 373 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-209ENST00000564068 SAMD9LQ8IVG5 1584 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-209ENST00000564068 TOM1O60784 492 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 NR1I2O75469 434 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
COMMD4-209ENST00000564068 APOBRQ0VD83 1088 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 CCDC181Q5TID7 509 aa14.57□□□□□ -0.08
COMMD4-209ENST00000564068 JAK2O60674 1132 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-209ENST00000564068 CUL4AQ13619 759 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 KIAA1328Q86T90 577 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 STRN4Q9NRL3 753 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 PUF60Q9UHX1 559 aaKnown RBP14.56□□□□□ -0.08
COMMD4-209ENST00000564068 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-209ENST00000564068 CCDC102BQ68D86 513 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 VPS18Q9P253 973 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 MAST1Q9Y2H9 1570 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
COMMD4-209ENST00000564068 CWF19L2Q2TBE0 894 aaKnown RBP14.55□□□□□ -0.08
COMMD4-209ENST00000564068 GTF2A1P52655 376 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-209ENST00000564068 LZTFL1Q9NQ48 299 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
COMMD4-209ENST00000564068 CCDC148Q8NFR7 591 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 CACTINQ8WUQ7 758 aaKnown RBP14.55□□□□□ -0.08
COMMD4-209ENST00000564068 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 GOLGA6L9A6NEM1 432 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 CCDC57Q2TAC2 916 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 UBE3BQ7Z3V4 1068 aa14.55□□□□□ -0.08
COMMD4-209ENST00000564068 SRRTQ9BXP5 876 aaKnown RBP14.55□□□□□ -0.08
COMMD4-209ENST00000564068 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 SPTLC2O15270 562 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 NBPF7P0C2Y1 421 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-209ENST00000564068 PIP4K2AP48426 406 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-209ENST00000564068 MICU3Q86XE3 530 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.08
COMMD4-209ENST00000564068 PLA2R1Q13018 1463 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 KLF18A0A0U1RQI7 1052 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 CDR1P51861 262 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 EIF5P55010 431 aaKnown RBP14.54□□□□□ -0.08
COMMD4-209ENST00000564068 PTH1RQ03431 593 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-209ENST00000564068 RASSF4Q9H2L5 321 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 A0A087WWV3 80 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 A0A087WZG4 1122 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 SLC27A2O14975 620 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 USP8P40818 1118 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 KCNG4Q8TDN1 519 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 CNNM1Q9NRU3 951 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 ARHGEF5Q12774 1597 aa14.54□□□□□ -0.08
COMMD4-209ENST00000564068 ERVK-7P63135 1459 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 FAM160A1Q05DH4 1040 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 CLEC17AQ6ZS10 378 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 TTC37Q6PGP7 1564 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 RHOXF2BP0C7M4 288 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 OTUD7BQ6GQQ9 843 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 VPS37DQ86XT2 251 aa14.53□□□□□ -0.08
COMMD4-209ENST00000564068 RHOXF2Q9BQY4 288 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms