RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ADM5C9JUS6 153 aa21.24■□□□□ 0.99
RNF40-205ENST00000563909 UBN2Q6ZU65 1347 aa21.24■□□□□ 0.99
RNF40-205ENST00000563909 TBC1D10BQ4KMP7 808 aaPredicted RBP21.23■□□□□ 0.99
RNF40-205ENST00000563909 DCPSQ96C86 337 aaKnown RBP21.23■□□□□ 0.99
RNF40-205ENST00000563909 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
RNF40-205ENST00000563909 ZBTB12Q9Y330 459 aaPredicted RBP21.23■□□□□ 0.99
RNF40-205ENST00000563909 MAP3K15Q6ZN16 1313 aa21.23■□□□□ 0.99
RNF40-205ENST00000563909 YDJCA8MPS7 323 aa21.22■□□□□ 0.99
RNF40-205ENST00000563909 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
RNF40-205ENST00000563909 REM2Q8IYK8 340 aaPredicted RBP21.22■□□□□ 0.99
RNF40-205ENST00000563909 MPNDQ8N594 471 aa21.22■□□□□ 0.99
RNF40-205ENST00000563909 IBTKQ9P2D0 1353 aaPredicted RBP21.22■□□□□ 0.99
RNF40-205ENST00000563909 EGFRP00533 1210 aa21.21■□□□□ 0.99
RNF40-205ENST00000563909 TTLL7Q6ZT98 887 aa21.21■□□□□ 0.99
RNF40-205ENST00000563909 MCM10Q7L590 875 aa21.21■□□□□ 0.99
RNF40-205ENST00000563909 NTSR2O95665 410 aa21.2■□□□□ 0.98
RNF40-205ENST00000563909 RBM26Q5T8P6 1007 aaKnown RBP21.2■□□□□ 0.98
RNF40-205ENST00000563909 SP8Q8IXZ3 490 aa21.2■□□□□ 0.98
RNF40-205ENST00000563909 ZNF296Q8WUU4 475 aaPredicted RBP21.2■□□□□ 0.98
RNF40-205ENST00000563909 DPF2Q92785 391 aa21.2■□□□□ 0.98
RNF40-205ENST00000563909 ZBTB3Q9H5J0 574 aa21.2■□□□□ 0.98
RNF40-205ENST00000563909 ABCC4O15439 1325 aa21.2■□□□□ 0.98
RNF40-205ENST00000563909 MKI67P46013 3256 aaKnown RBP21.19■□□□□ 0.98
RNF40-205ENST00000563909 BBOX1O75936 387 aa21.19■□□□□ 0.98
RNF40-205ENST00000563909 RTF1Q92541 710 aaKnown RBP21.19■□□□□ 0.98
RNF40-205ENST00000563909 NUP98P52948 1817 aa21.19■□□□□ 0.98
RNF40-205ENST00000563909 TBC1D8O95759 1140 aa21.18■□□□□ 0.98
RNF40-205ENST00000563909 PRKAR2BP31323 418 aa21.18■□□□□ 0.98
RNF40-205ENST00000563909 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
RNF40-205ENST00000563909 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
RNF40-205ENST00000563909 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
RNF40-205ENST00000563909 PPP1R42Q7Z4L9 355 aa21.17■□□□□ 0.98
RNF40-205ENST00000563909 RASAL3Q86YV0 1011 aa21.17■□□□□ 0.98
RNF40-205ENST00000563909 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
RNF40-205ENST00000563909 PSMD14O00487 310 aa21.16■□□□□ 0.98
RNF40-205ENST00000563909 FBXO46Q6PJ61 603 aaPredicted RBP21.16■□□□□ 0.98
RNF40-205ENST00000563909 SULF1Q8IWU6 871 aa21.16■□□□□ 0.98
RNF40-205ENST00000563909 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
RNF40-205ENST00000563909 POLR2AP24928 1970 aaKnown RBP21.16■□□□□ 0.98
RNF40-205ENST00000563909 MYL6BP14649 208 aa21.15■□□□□ 0.98
RNF40-205ENST00000563909 FXR1P51114 621 aaKnown RBP eCLIP21.15■□□□□ 0.98
RNF40-205ENST00000563909 DCTN1Q14203 1278 aa21.15■□□□□ 0.98
RNF40-205ENST00000563909 SLC10A5Q5PT55 438 aa21.15■□□□□ 0.98
RNF40-205ENST00000563909 CDCA5Q96FF9 252 aa21.14■□□□□ 0.97
RNF40-205ENST00000563909 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
RNF40-205ENST00000563909 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
RNF40-205ENST00000563909 PARP10Q53GL7 1025 aa21.12■□□□□ 0.97
RNF40-205ENST00000563909 GIGYF2Q6Y7W6 1299 aaKnown RBP21.12■□□□□ 0.97
RNF40-205ENST00000563909 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
RNF40-205ENST00000563909 GGA3Q9NZ52 723 aa21.12■□□□□ 0.97
RNF40-205ENST00000563909 GPR25O00155 361 aa21.11■□□□□ 0.97
RNF40-205ENST00000563909 RPS12P25398 132 aaKnown RBP21.11■□□□□ 0.97
RNF40-205ENST00000563909 WASHC4Q2M389 1173 aa21.11■□□□□ 0.97
RNF40-205ENST00000563909 DBNDD1Q9H9R9 158 aa21.11■□□□□ 0.97
RNF40-205ENST00000563909 ASTN2O75129 1339 aaPredicted RBP21.1■□□□□ 0.97
RNF40-205ENST00000563909 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
RNF40-205ENST00000563909 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
RNF40-205ENST00000563909 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
RNF40-205ENST00000563909 DDX46Q7L014 1031 aaKnown RBP21.1■□□□□ 0.97
RNF40-205ENST00000563909 KCNQ5Q9NR82 932 aa21.1■□□□□ 0.97
RNF40-205ENST00000563909 RIMBP2O15034 1052 aa21.09■□□□□ 0.97
RNF40-205ENST00000563909 LAMB4A4D0S4 1761 aa21.09■□□□□ 0.97
RNF40-205ENST00000563909 HCLS1P14317 486 aaPredicted RBP21.08■□□□□ 0.97
RNF40-205ENST00000563909 FKBP1BP68106 108 aa21.08■□□□□ 0.97
RNF40-205ENST00000563909 GRAPQ13588 217 aa21.08■□□□□ 0.97
RNF40-205ENST00000563909 GRAPLQ8TC17 118 aaPredicted RBP21.08■□□□□ 0.97
RNF40-205ENST00000563909 HTTP42858 3142 aa21.08■□□□□ 0.96
RNF40-205ENST00000563909 NOM1Q5C9Z4 860 aaKnown RBP21.07■□□□□ 0.96
RNF40-205ENST00000563909 DUOX1Q9NRD9 1551 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 POTEFA5A3E0 1075 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
RNF40-205ENST00000563909 FKTNO75072 461 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 TM4SF4P48230 202 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 DOK7Q18PE1 504 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 ANGEL2Q5VTE6 544 aaKnown RBP21.06■□□□□ 0.96
RNF40-205ENST00000563909 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
RNF40-205ENST00000563909 CENPFP49454 3210 aa21.05■□□□□ 0.96
RNF40-205ENST00000563909 UBE2Q2LH0YL09 131 aa21.05■□□□□ 0.96
RNF40-205ENST00000563909 ECE2O60344 883 aa21.05■□□□□ 0.96
RNF40-205ENST00000563909 TMC4Q7Z404 712 aa21.05■□□□□ 0.96
RNF40-205ENST00000563909 NSFL1CQ9UNZ2 370 aaKnown RBP21.05■□□□□ 0.96
RNF40-205ENST00000563909 RTL9Q8NET4 1388 aa21.05■□□□□ 0.96
RNF40-205ENST00000563909 C6orf229H3BNL8 230 aa21.04■□□□□ 0.96
RNF40-205ENST00000563909 SCARF1Q14162 830 aa21.04■□□□□ 0.96
RNF40-205ENST00000563909 SZT2Q5T011 3432 aa21.03■□□□□ 0.96
RNF40-205ENST00000563909 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
RNF40-205ENST00000563909 R3HDMLQ9H3Y0 253 aa21.03■□□□□ 0.96
RNF40-205ENST00000563909 EIF4A1P60842 406 aaKnown RBP21.02■□□□□ 0.96
RNF40-205ENST00000563909 MKRN3Q13064 507 aaKnown RBP21.02■□□□□ 0.96
RNF40-205ENST00000563909 POLLQ9UGP5 575 aa21.02■□□□□ 0.96
RNF40-205ENST00000563909 COLQQ9Y215 455 aaPredicted RBP21.02■□□□□ 0.96
RNF40-205ENST00000563909 LAMB2P55268 1798 aa21.01■□□□□ 0.95
RNF40-205ENST00000563909 PAPPA2Q9BXP8 1791 aa21.01■□□□□ 0.95
RNF40-205ENST00000563909 VIL1P09327 827 aaKnown RBP21.01■□□□□ 0.95
RNF40-205ENST00000563909 U2AF1L5P0DN76 240 aaPredicted RBP21.01■□□□□ 0.95
RNF40-205ENST00000563909 U2AF1Q01081 240 aaKnown RBP eCLIP21.01■□□□□ 0.95
RNF40-205ENST00000563909 PNISRQ8TF01 805 aaKnown RBP21.01■□□□□ 0.95
RNF40-205ENST00000563909 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
RNF40-205ENST00000563909 ANKRD36CQ5JPF3 1778 aa21■□□□□ 0.95
RNF40-205ENST00000563909 CFAP53Q96M91 514 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms