RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 SLC35F4A4IF30 521 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 BACH1O14867 736 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
SMG1-209ENST00000563836 PTK7Q13308 1070 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 MTFR1Q15390 333 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 CRTC2Q53ET0 693 aaPredicted RBP11.24□□□□□ -0.61
SMG1-209ENST00000563836 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
SMG1-209ENST00000563836 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
SMG1-209ENST00000563836 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
SMG1-209ENST00000563836 POU4F2Q12837 409 aa11.23□□□□□ -0.61
SMG1-209ENST00000563836 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
SMG1-209ENST00000563836 WDR44Q5JSH3 913 aa11.23□□□□□ -0.61
SMG1-209ENST00000563836 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
SMG1-209ENST00000563836 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
SMG1-209ENST00000563836 IQGAP1P46940 1657 aa11.23□□□□□ -0.61
SMG1-209ENST00000563836 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L10C9JJH3 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L12C9JPN9 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L21D6R901 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L22D6RA61 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L17D6RBQ6 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L19D6RCP7 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L20D6RJB6 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 M0R2N6 131 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
SMG1-209ENST00000563836 ANP32CO43423 234 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 USP17L24Q0WX57 530 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
SMG1-209ENST00000563836 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
SMG1-209ENST00000563836 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
SMG1-209ENST00000563836 PTPRMP28827 1452 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 A6NJY4 79 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 RHOQP17081 205 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 EPHA4P54764 986 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 POGKQ9P215 609 aa11.21□□□□□ -0.61
SMG1-209ENST00000563836 ZNF142P52746 1687 aaPredicted RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 CCDC7Q96M83 1385 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 TMEM214Q6NUQ4 689 aaKnown RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 RHBDD1Q8TEB9 315 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
SMG1-209ENST00000563836 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
SMG1-209ENST00000563836 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
SMG1-209ENST00000563836 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
SMG1-209ENST00000563836 SLIT1O75093 1534 aa11.19□□□□□ -0.62
SMG1-209ENST00000563836 PLEKHG1Q9ULL1 1385 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
SMG1-209ENST00000563836 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 H3BM21 787 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 SEC13P55735 322 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 C4orf17Q53FE4 359 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 ZNF295-AS1Q8N0V1 137 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 ARXQ96QS3 562 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 SCHIP1Q9P0W5 487 aaPredicted RBP11.18□□□□□ -0.62
SMG1-209ENST00000563836 STK26Q9P289 416 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 DYRK1BQ9Y463 629 aa11.18□□□□□ -0.62
SMG1-209ENST00000563836 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
SMG1-209ENST00000563836 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 VEGFBP49765 207 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 FOXK2Q01167 660 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 DPYDQ12882 1025 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
SMG1-209ENST00000563836 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
SMG1-209ENST00000563836 WASHC2AQ641Q2 1341 aa11.16□□□□□ -0.62
SMG1-209ENST00000563836 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
SMG1-209ENST00000563836 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
SMG1-209ENST00000563836 QRICH2Q9H0J4 1663 aa11.16□□□□□ -0.62
SMG1-209ENST00000563836 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
SMG1-209ENST00000563836 ARHGAP23Q9P227 1491 aa11.15□□□□□ -0.62
SMG1-209ENST00000563836 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
SMG1-209ENST00000563836 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SMG1-209ENST00000563836 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
SMG1-209ENST00000563836 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
SMG1-209ENST00000563836 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
SMG1-209ENST00000563836 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
SMG1-209ENST00000563836 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
SMG1-209ENST00000563836 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
SMG1-209ENST00000563836 WFS1O76024 890 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 ATG7O95352 703 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 ITGA6P23229 1130 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 PHKA2P46019 1235 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 TSEN2Q8NCE0 465 aaKnown RBP11.14□□□□□ -0.63
SMG1-209ENST00000563836 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 ADGRB1O14514 1584 aa11.14□□□□□ -0.63
SMG1-209ENST00000563836 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms