RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
MAP1LC3B-204ENST00000563720 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
MAP1LC3B-204ENST00000563720 ECE1P42892 770 aa22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 LARGE2Q8N3Y3 721 aa22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 CAPNS2Q96L46 248 aa22.54■■□□□ 1.2
MAP1LC3B-204ENST00000563720 EPS15P42566 896 aa22.53■■□□□ 1.2
MAP1LC3B-204ENST00000563720 FMR1Q06787 632 aaKnown RBP eCLIP22.53■■□□□ 1.2
MAP1LC3B-204ENST00000563720 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
MAP1LC3B-204ENST00000563720 GRIPAP1Q4V328 841 aa22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 TSR2Q969E8 191 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 TRMT112Q9UI30 125 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 CACNA1FO60840 1977 aa22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 SH3TC1Q8TE82 1336 aa22.52■■□□□ 1.2
MAP1LC3B-204ENST00000563720 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 SCNN1DP51172 638 aa22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 CYP4F22Q6NT55 531 aa22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 USP50Q70EL3 339 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 SLC51AQ86UW1 340 aa22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TSPYL6Q8N831 410 aa22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 GPR101Q96P66 508 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 PHAXQ9H814 394 aaKnown RBP22.51■■□□□ 1.19
MAP1LC3B-204ENST00000563720 COL4A5P29400 1685 aa22.5■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
MAP1LC3B-204ENST00000563720 PPEF1O14829 653 aaPredicted RBP22.5■■□□□ 1.19
MAP1LC3B-204ENST00000563720 NIM1KQ8IY84 436 aa22.5■■□□□ 1.19
MAP1LC3B-204ENST00000563720 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
MAP1LC3B-204ENST00000563720 CCDC85CA6NKD9 419 aa22.49■■□□□ 1.19
MAP1LC3B-204ENST00000563720 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
MAP1LC3B-204ENST00000563720 ABCC4O15439 1325 aa22.49■■□□□ 1.19
MAP1LC3B-204ENST00000563720 LTBP1Q14766 1721 aa22.48■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TRAF5O00463 557 aa22.48■■□□□ 1.19
MAP1LC3B-204ENST00000563720 SLC34A2O95436 690 aa22.48■■□□□ 1.19
MAP1LC3B-204ENST00000563720 IL16Q14005 1332 aa22.48■■□□□ 1.19
MAP1LC3B-204ENST00000563720 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TRIM28Q13263 835 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 CST9Q5W186 159 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 RIC3Q7Z5B4 369 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TMX4Q9H1E5 349 aaPredicted RBP22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 LRRC37AA6NMS7 1700 aa22.47■■□□□ 1.19
MAP1LC3B-204ENST00000563720 PPIP5K2O43314 1243 aa22.46■■□□□ 1.19
MAP1LC3B-204ENST00000563720 MLLT1Q03111 559 aaPredicted RBP22.45■■□□□ 1.18
MAP1LC3B-204ENST00000563720 FAM89AQ96GI7 184 aa22.45■■□□□ 1.18
MAP1LC3B-204ENST00000563720 CHMP4AQ9BY43 222 aa22.45■■□□□ 1.18
MAP1LC3B-204ENST00000563720 TSKSQ9UJT2 592 aa22.45■■□□□ 1.18
MAP1LC3B-204ENST00000563720 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
MAP1LC3B-204ENST00000563720 AOC3Q16853 763 aa22.44■■□□□ 1.18
MAP1LC3B-204ENST00000563720 THSD7BQ9C0I4 1608 aa22.44■■□□□ 1.18
MAP1LC3B-204ENST00000563720 ADARB2Q9NS39 739 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-204ENST00000563720 COL4A1P02462 1669 aa22.43■■□□□ 1.18
MAP1LC3B-204ENST00000563720 AOC2O75106 756 aa22.43■■□□□ 1.18
MAP1LC3B-204ENST00000563720 MAP2K2P36507 400 aa22.43■■□□□ 1.18
MAP1LC3B-204ENST00000563720 GPRC5DQ9NZD1 345 aa22.43■■□□□ 1.18
MAP1LC3B-204ENST00000563720 SALL2Q9Y467 1007 aaPredicted RBP22.43■■□□□ 1.18
MAP1LC3B-204ENST00000563720 FANCIQ9NVI1 1328 aa22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 MYH3P11055 1940 aa22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 BBOX1O75936 387 aa22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 TWISTNBQ3B726 338 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 DDX46Q7L014 1031 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 MYD88Q99836 296 aa22.42■■□□□ 1.18
MAP1LC3B-204ENST00000563720 TRPM7Q96QT4 1865 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 CELF2O95319 508 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 GRAPQ13588 217 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 SF3B3Q15393 1217 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
MAP1LC3B-204ENST00000563720 DDX58O95786 925 aaKnown RBP22.4■■□□□ 1.18
MAP1LC3B-204ENST00000563720 SAPCD2Q86UD0 394 aa22.4■■□□□ 1.18
MAP1LC3B-204ENST00000563720 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
MAP1LC3B-204ENST00000563720 METTL22Q9BUU2 404 aaPredicted RBP22.4■■□□□ 1.18
MAP1LC3B-204ENST00000563720 ZNRF3Q9ULT6 936 aa22.4■■□□□ 1.18
MAP1LC3B-204ENST00000563720 DUOX1Q9NRD9 1551 aa22.39■■□□□ 1.18
MAP1LC3B-204ENST00000563720 IRS4O14654 1257 aaPredicted RBP22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CA12O43570 354 aa22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 RGS19P49795 217 aa22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CXCL9Q07325 125 aa22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 ZBTB38Q8NAP3 1195 aaPredicted RBP22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 STK31Q9BXU1 1019 aa22.39■■□□□ 1.17
MAP1LC3B-204ENST00000563720 GMPSP49915 693 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
MAP1LC3B-204ENST00000563720 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3B-204ENST00000563720 GLIS2Q9BZE0 524 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3B-204ENST00000563720 MAP3K2Q9Y2U5 619 aa22.38■■□□□ 1.17
MAP1LC3B-204ENST00000563720 KSR2Q6VAB6 950 aa22.37■■□□□ 1.17
MAP1LC3B-204ENST00000563720 G2E3Q7L622 706 aa22.37■■□□□ 1.17
MAP1LC3B-204ENST00000563720 BCL2L13Q9BXK5 485 aa22.37■■□□□ 1.17
MAP1LC3B-204ENST00000563720 ZNF408Q9H9D4 720 aa22.37■■□□□ 1.17
MAP1LC3B-204ENST00000563720 PI4KAP2A4QPH2 592 aa22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 CIAPIN1Q6FI81 312 aa22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 DPP8Q6V1X1 898 aaPredicted RBP22.36■■□□□ 1.17
MAP1LC3B-204ENST00000563720 TMC4Q7Z404 712 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms