RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NID1P14543 1247 aa6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 TARSP26639 723 aaKnown RBP6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 RGL4Q8IZJ4 473 aa6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 NUDT8Q8WV74 236 aa6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 LILRB5O75023 590 aa6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 MAP3K6O95382 1288 aa6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 RARAP10276 462 aa6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 C14orf37Q86TY3 774 aa6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 CMTR1Q8N1G2 835 aaKnown RBP6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 JPH1Q9HDC5 661 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P33-201ENST00000563485 SPDYE3A6NKU9 549 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 ZBTB42B2RXF5 422 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 XYLBO75191 536 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 PSAPL1Q6NUJ1 521 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 C11orf16Q9NQ32 467 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 KCNMB2Q9Y691 235 aa6.92□□□□□ -1.3
HMGB1P33-201ENST00000563485 EGFRP00533 1210 aa6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 CPB1P15086 417 aa6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 BAG6P46379 1132 aa6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 PRRT3Q5FWE3 981 aa6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 FAM35AQ86V20 835 aa6.91□□□□□ -1.3
HMGB1P33-201ENST00000563485 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 GPLD1P80108 840 aa6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 TRPM4Q8TD43 1214 aa6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 SEPT3Q9UH03 358 aa6.9□□□□□ -1.3
HMGB1P33-201ENST00000563485 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P33-201ENST00000563485 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
HMGB1P33-201ENST00000563485 PCSK7Q16549 785 aa6.89□□□□□ -1.31
HMGB1P33-201ENST00000563485 PERM1Q5SV97 790 aa6.89□□□□□ -1.31
HMGB1P33-201ENST00000563485 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
HMGB1P33-201ENST00000563485 SCNN1AP37088 669 aa6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 ZAP70P43403 619 aa6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 PLAURQ03405 335 aa6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 TLR7Q9NYK1 1049 aaKnown RBP6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 STIM2Q9P246 746 aa6.88□□□□□ -1.31
HMGB1P33-201ENST00000563485 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 TMEM88BA6NKF7 163 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 ZBTB39O15060 712 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 MMP20O60882 483 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 ADAM23O75077 832 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 APBA3O96018 575 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 FURINP09958 794 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 NRLP54845 237 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 GRIK4Q16099 956 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 GRIK5Q16478 980 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 FRRS1LQ9P0K9 344 aa6.87□□□□□ -1.31
HMGB1P33-201ENST00000563485 EIF2AK2P19525 551 aaKnown RBP6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 ARID4AP29374 1257 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 GPR152Q8TDT2 470 aa6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 PIK3R5Q8WYR1 880 aa6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 SMG9Q9H0W8 520 aaKnown RBP6.86□□□□□ -1.31
HMGB1P33-201ENST00000563485 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 J3QW42 95 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 PPP1R15AO75807 674 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 PSAPP07602 524 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 GATA4P43694 442 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 NLRP13Q86W25 1043 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 ABTB2Q8N961 1025 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 FAM13BQ9NYF5 915 aa6.85□□□□□ -1.31
HMGB1P33-201ENST00000563485 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 CARNS1A5YM72 827 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 K7ELQ4 463 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 RAC1P63000 192 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 DOC2BQ14184 412 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 MSL1Q68DK7 614 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 NACC1Q96RE7 527 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
HMGB1P33-201ENST00000563485 LOC102724428A0A0B4J2F2 783 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 HOXD8P13378 290 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 ELNP15502 786 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 SELPP16109 830 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 SOX18P35713 384 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 SIK1P57059 783 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 SHISA2Q6UWI4 295 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 FMR1NBQ8N0W7 255 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 HELQQ8TDG4 1101 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 TTC9Q92623 222 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
HMGB1P33-201ENST00000563485 GHRHP01286 108 aa6.82□□□□□ -1.32
HMGB1P33-201ENST00000563485 SSFA2P28290 1259 aa6.82□□□□□ -1.32
HMGB1P33-201ENST00000563485 COL13A1Q5TAT6 717 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 NUDT16Q96DE0 195 aaKnown RBP6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms