RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PCSK7Q16549 785 aa6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 SWI5Q1ZZU3 235 aa6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 NUDT8Q8WV74 236 aa6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 NACC1Q96RE7 527 aa6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 JPH1Q9HDC5 661 aaPredicted RBP6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 OPLAHO14841 1288 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 TARSP26639 723 aaKnown RBP6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 ARSDP51689 593 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 AFF1P51825 1210 aaKnown RBP6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 GRIK4Q16099 956 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 PSAPL1Q6NUJ1 521 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 ILDR2Q71H61 639 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 CLP1Q92989 425 aaKnown RBP6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 IFT43Q96FT9 208 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 TRAIPQ9BWF2 469 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 ZFATQ9P243 1243 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 LRFN2Q9ULH4 789 aa6.09□□□□□ -1.43
SHCBP1-202ENST00000563219 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
SHCBP1-202ENST00000563219 RGS9O75916 674 aaPredicted RBP6.08□□□□□ -1.44
SHCBP1-202ENST00000563219 FAM35AQ86V20 835 aa6.08□□□□□ -1.44
SHCBP1-202ENST00000563219 SEMA6BQ9H3T3 888 aa6.08□□□□□ -1.44
SHCBP1-202ENST00000563219 NAGPAQ9UK23 515 aa6.08□□□□□ -1.44
SHCBP1-202ENST00000563219 ZBTB42B2RXF5 422 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 C9orf172C9J069 976 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 SASH3O75995 380 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 EGFRP00533 1210 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 ITGB7P26010 798 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 FKBP5Q13451 457 aaPredicted RBP6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 COX20Q5RI15 118 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 DHX32Q7L7V1 743 aaKnown RBP6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 KRT25Q7Z3Z0 450 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 TRPM4Q8TD43 1214 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 PRIMPOLQ96LW4 560 aa6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 RTCBQ9Y3I0 505 aaKnown RBP6.07□□□□□ -1.44
SHCBP1-202ENST00000563219 RARAP10276 462 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 ELNP15502 786 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 SELPP16109 830 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 RAC1P63000 192 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 RSPO4Q2I0M5 234 aaPredicted RBP6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 NKAPLQ5M9Q1 402 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 TREML1Q86YW5 311 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 TPSG1Q9NRR2 321 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 FRRS1LQ9P0K9 344 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 SLAIN2Q9P270 581 aa6.06□□□□□ -1.44
SHCBP1-202ENST00000563219 PDIA4P13667 645 aaKnown RBP6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 CPB1P15086 417 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 GRIK5Q16478 980 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 OCLNQ16625 522 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 PERM1Q5SV97 790 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 XP32Q5T750 250 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 MSL1Q68DK7 614 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 DMRTC2Q8IXT2 367 aaPredicted RBP6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 TTC9Q92623 222 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 LENG1Q96BZ8 264 aaPredicted RBP6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 LPIN3Q9BQK8 851 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 USP20Q9Y2K6 914 aa6.05□□□□□ -1.44
SHCBP1-202ENST00000563219 CARNS1A5YM72 827 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 PRMT3O60678 531 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 XYLBO75191 536 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 ARID4AP29374 1257 aaPredicted RBP6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 GPLD1P80108 840 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 ADGRE1Q14246 886 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 ELMSAN1Q6PJG2 1045 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 FMR1NBQ8N0W7 255 aaPredicted RBP6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 CMTR1Q8N1G2 835 aaKnown RBP6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 COL26A1Q96A83 441 aa6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 TLR7Q9NYK1 1049 aaKnown RBP6.04□□□□□ -1.44
SHCBP1-202ENST00000563219 BRD2P25440 801 aaKnown RBP6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 SSFA2P28290 1259 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 NRLP54845 237 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 MLLT1Q03111 559 aaPredicted RBP6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 MBTPS1Q14703 1052 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 B4GALNT3Q6L9W6 998 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 ETFBKMTQ8IXQ9 262 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 RGL4Q8IZJ4 473 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 Q8N3U1 123 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 DTWD1Q8N5C7 304 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 SAP130Q9H0E3 1048 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 KCNMB2Q9Y691 235 aa6.03□□□□□ -1.44
SHCBP1-202ENST00000563219 BRD1O95696 1058 aa6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 ATP2B4P23634 1241 aa6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 PLAURQ03405 335 aa6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 C16orf46Q6P387 395 aa6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 CXXC1Q9P0U4 656 aaPredicted RBP6.02□□□□□ -1.45
SHCBP1-202ENST00000563219 LOC102724428A0A0B4J2F2 783 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 DYRK3O43781 588 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 SIK1P57059 783 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 PHLDB3Q6NSJ2 640 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 HFE2Q6ZVN8 426 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 TXNRD3Q86VQ6 643 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 FBXO11Q86XK2 927 aa6.01□□□□□ -1.45
SHCBP1-202ENST00000563219 MMP20O60882 483 aa6□□□□□ -1.45
SHCBP1-202ENST00000563219 PTCD1O75127 700 aaKnown RBP6□□□□□ -1.45
SHCBP1-202ENST00000563219 PSAPP07602 524 aa6□□□□□ -1.45
SHCBP1-202ENST00000563219 CAPN12Q6ZSI9 719 aa6□□□□□ -1.45
SHCBP1-202ENST00000563219 WFDC8Q8IUA0 241 aa6□□□□□ -1.45
SHCBP1-202ENST00000563219 SMG9Q9H0W8 520 aaKnown RBP6□□□□□ -1.45
SHCBP1-202ENST00000563219 USP21Q9UK80 565 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms