RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SIL1Q9H173 461 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 NUP62CLQ9H1M0 184 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 DDX19AQ9NUU7 478 aaKnown RBP15.53■□□□□ 0.08
USB1-207ENST00000563149 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
USB1-207ENST00000563149 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
USB1-207ENST00000563149 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
USB1-207ENST00000563149 TNNI3KQ59H18 835 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 CDC37L1Q7L3B6 337 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 FAM200AQ8TCP9 573 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 FPGT-TNNI3KV9GXZ4 949 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
USB1-207ENST00000563149 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.07
USB1-207ENST00000563149 LMOD2Q6P5Q4 547 aa15.52■□□□□ 0.07
USB1-207ENST00000563149 MYRIPQ8NFW9 859 aa15.52■□□□□ 0.07
USB1-207ENST00000563149 NEK1Q96PY6 1258 aa15.52■□□□□ 0.07
USB1-207ENST00000563149 ALS2Q96Q42 1657 aa15.51■□□□□ 0.07
USB1-207ENST00000563149 MYL6BP14649 208 aa15.51■□□□□ 0.07
USB1-207ENST00000563149 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
USB1-207ENST00000563149 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
USB1-207ENST00000563149 ZNF589Q86UQ0 364 aaPredicted RBP15.51■□□□□ 0.07
USB1-207ENST00000563149 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
USB1-207ENST00000563149 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
USB1-207ENST00000563149 SLC39A6Q13433 755 aa15.5■□□□□ 0.07
USB1-207ENST00000563149 DNTTIP2Q5QJE6 756 aaKnown RBP15.5■□□□□ 0.07
USB1-207ENST00000563149 RBM43Q6ZSC3 357 aaKnown RBP15.5■□□□□ 0.07
USB1-207ENST00000563149 GTF3C6Q969F1 213 aa15.5■□□□□ 0.07
USB1-207ENST00000563149 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
USB1-207ENST00000563149 ZSCAN16Q9H4T2 348 aaPredicted RBP15.5■□□□□ 0.07
USB1-207ENST00000563149 C1orf167Q5SNV9 1468 aa15.5■□□□□ 0.07
USB1-207ENST00000563149 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 MCMDC2Q4G0Z9 681 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 TTC5Q8N0Z6 440 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 NFATC2IPQ8NCF5 419 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 FMNL2Q96PY5 1086 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 HAUS7Q99871 368 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 DBNLQ9UJU6 430 aaKnown RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
USB1-207ENST00000563149 TFCP2Q12800 502 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 KLHDC4Q8TBB5 520 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 LEO1Q8WVC0 666 aaPredicted RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
USB1-207ENST00000563149 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
USB1-207ENST00000563149 CAVIN2O95810 425 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 LIG1P18858 919 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 RBM10P98175 930 aaKnown RBP15.48■□□□□ 0.07
USB1-207ENST00000563149 TYRO3Q06418 890 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 FERMT3Q86UX7 667 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 CHMP4CQ96CF2 233 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 ZNF830Q96NB3 372 aaPredicted RBP15.48■□□□□ 0.07
USB1-207ENST00000563149 TNMDQ9H2S6 317 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 CLSTN2Q9H4D0 955 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 GPR108Q9NPR9 543 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 FAM13BQ9NYF5 915 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 MRVI1Q9Y6F6 885 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
USB1-207ENST00000563149 TMEM94Q12767 1356 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 TPRNQ4KMQ1 711 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 PALLDQ8WX93 1383 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 AP5Z1O43299 807 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 RESTQ13127 1097 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 SMARCC2Q8TAQ2 1214 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 KIAA1524Q8TCG1 905 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 DACT1Q9NYF0 836 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 KIF3AQ9Y496 699 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 TAF6LQ9Y6J9 622 aa15.47■□□□□ 0.07
USB1-207ENST00000563149 ZNF609O15014 1411 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 LAMB4A4D0S4 1761 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 COL18A1P39060 1754 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 CASP7P55210 303 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 Q6ZUG5 572 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.46■□□□□ 0.07
USB1-207ENST00000563149 TCEANC2Q96MN5 208 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
USB1-207ENST00000563149 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.06
USB1-207ENST00000563149 A0A087WZG4 1122 aa15.45■□□□□ 0.06
USB1-207ENST00000563149 ZC3H6P61129 1189 aaKnown RBP15.45■□□□□ 0.06
USB1-207ENST00000563149 STK3Q13188 491 aa15.45■□□□□ 0.06
USB1-207ENST00000563149 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
USB1-207ENST00000563149 ATL3Q6DD88 541 aa15.45■□□□□ 0.06
USB1-207ENST00000563149 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
USB1-207ENST00000563149 DSCC1Q9BVC3 393 aa15.45■□□□□ 0.06
USB1-207ENST00000563149 MEGF6O75095 1541 aa15.45■□□□□ 0.06
USB1-207ENST00000563149 PFKFB2O60825 505 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 CYP21A2P08686 494 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 FAM173BQ6P4H8 233 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 UBE3BQ7Z3V4 1068 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms