RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
AC040174.1-201ENST00000563003 CALCOCO1Q9P1Z2 691 aa16.18■□□□□ 0.18
AC040174.1-201ENST00000563003 ROBO1Q9Y6N7 1651 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 CCDC144BQ3MJ40 725 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 TTC6Q86TZ1 520 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 CCDC83Q8IWF9 413 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 RAD50Q92878 1312 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 CPA1P15085 419 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 PRDM11Q9NQV5 511 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 CLIP2Q9UDT6 1046 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 MEGF6O75095 1541 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 SCN11AQ9UI33 1791 aa16.17■□□□□ 0.18
AC040174.1-201ENST00000563003 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 TULP2O00295 520 aa16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 DNAJC2Q99543 621 aaKnown RBP16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 PHKG2P15735 406 aa16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 CAPN2P17655 700 aa16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
AC040174.1-201ENST00000563003 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 ELF2Q15723 593 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 TNMDQ9H2S6 317 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 PXDNLA1KZ92 1463 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 SGSM2O43147 1006 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 DACT1Q9NYF0 836 aa16.15■□□□□ 0.18
AC040174.1-201ENST00000563003 HEG1Q9ULI3 1381 aa16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 HSPA1LP34931 641 aa16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
AC040174.1-201ENST00000563003 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 KRT85P78386 507 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 ATP8B2P98198 1209 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 NYAP1Q6ZVC0 841 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 LRRC8AQ8IWT6 810 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 ERO1AQ96HE7 468 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 ZNF446Q9NWS9 450 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 GNAI3P08754 354 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 FAM193AP78312 1265 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 ARID5BQ14865 1188 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 FAM173BQ6P4H8 233 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 PHAXQ9H814 394 aaKnown RBP16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
AC040174.1-201ENST00000563003 ZNF165P49910 485 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 AOX1Q06278 1338 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 DCAF5Q96JK2 942 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 DNAJC25Q9H1X3 360 aa16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
AC040174.1-201ENST00000563003 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 ELP1O95163 1332 aa16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 CYP2C19P33261 490 aa16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 CREBRFQ8IUR6 639 aa16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 NOL10Q9BSC4 688 aaKnown RBP16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 COL5A2P05997 1499 aaPredicted RBP16.11■□□□□ 0.17
AC040174.1-201ENST00000563003 NPHP1O15259 732 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 CYP27B1O15528 508 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 CDC25BP30305 580 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 TOM1L2Q6ZVM7 507 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 HNRNPH2P55795 449 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 LARP1BQ659C4 914 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 CDC37L1Q7L3B6 337 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 PARP4Q9UKK3 1724 aaKnown RBP16.1■□□□□ 0.17
AC040174.1-201ENST00000563003 GOLGA6L4A6NEF3 574 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 SKILP12757 684 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 ZSCAN31Q96LW9 406 aaPredicted RBP16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 CLSTN2Q9H4D0 955 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 SH2B1Q9NRF2 756 aaPredicted RBP16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 TRMT1Q9NXH9 659 aaKnown RBP16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 ME3Q16798 604 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms