RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZFATQ9P243 1243 aa8.77□□□□□ -1.01
SMG1-206ENST00000562668 GATA4P43694 442 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 PCSK7Q16549 785 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 COX20Q5RI15 118 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 NACC1Q96RE7 527 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
SMG1-206ENST00000562668 RARAP10276 462 aa8.75□□□□□ -1.01
SMG1-206ENST00000562668 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
SMG1-206ENST00000562668 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
SMG1-206ENST00000562668 TREML1Q86YW5 311 aa8.75□□□□□ -1.01
SMG1-206ENST00000562668 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
SMG1-206ENST00000562668 AFF1P51825 1210 aaKnown RBP8.74□□□□□ -1.01
SMG1-206ENST00000562668 GPLD1P80108 840 aa8.74□□□□□ -1.01
SMG1-206ENST00000562668 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
SMG1-206ENST00000562668 FAM35AQ86V20 835 aa8.74□□□□□ -1.01
SMG1-206ENST00000562668 COL26A1Q96A83 441 aa8.74□□□□□ -1.01
SMG1-206ENST00000562668 CCDC97Q96F63 343 aaPredicted RBP8.74□□□□□ -1.01
SMG1-206ENST00000562668 CXXC1Q9P0U4 656 aaPredicted RBP8.74□□□□□ -1.01
SMG1-206ENST00000562668 A0A0A0MRY4 1105 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 OPLAHO14841 1288 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 RGS9O75916 674 aaPredicted RBP8.73□□□□□ -1.01
SMG1-206ENST00000562668 SASH3O75995 380 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 CPB1P15086 417 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 TARSP26639 723 aaKnown RBP8.73□□□□□ -1.01
SMG1-206ENST00000562668 RAC1P63000 192 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 DOC2BQ14184 412 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 C16orf46Q6P387 395 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 RGL4Q8IZJ4 473 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 FRRS1LQ9P0K9 344 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 USP20Q9Y2K6 914 aa8.73□□□□□ -1.01
SMG1-206ENST00000562668 EGFRP00533 1210 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 ELNP15502 786 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
SMG1-206ENST00000562668 GRIK4Q16099 956 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 LPIN3Q9BQK8 851 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 MKNK1Q9BUB5 465 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 SAP130Q9H0E3 1048 aa8.72□□□□□ -1.01
SMG1-206ENST00000562668 ZBTB42B2RXF5 422 aa8.71□□□□□ -1.02
SMG1-206ENST00000562668 XYLBO75191 536 aa8.71□□□□□ -1.02
SMG1-206ENST00000562668 NRLP54845 237 aa8.71□□□□□ -1.02
SMG1-206ENST00000562668 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
SMG1-206ENST00000562668 ETFBKMTQ8IXQ9 262 aa8.71□□□□□ -1.02
SMG1-206ENST00000562668 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
SMG1-206ENST00000562668 CLP1Q92989 425 aaKnown RBP8.71□□□□□ -1.02
SMG1-206ENST00000562668 PERM1Q5SV97 790 aa8.7□□□□□ -1.02
SMG1-206ENST00000562668 SERPINA10Q9UK55 444 aa8.7□□□□□ -1.02
SMG1-206ENST00000562668 KCNMB2Q9Y691 235 aa8.7□□□□□ -1.02
SMG1-206ENST00000562668 TNFRSF10BO14763 440 aa8.69□□□□□ -1.02
SMG1-206ENST00000562668 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
SMG1-206ENST00000562668 BRD2P25440 801 aaKnown RBP8.69□□□□□ -1.02
SMG1-206ENST00000562668 ELMSAN1Q6PJG2 1045 aa8.69□□□□□ -1.02
SMG1-206ENST00000562668 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
SMG1-206ENST00000562668 C9orf172C9J069 976 aa8.68□□□□□ -1.02
SMG1-206ENST00000562668 EIF2AK2P19525 551 aaKnown RBP8.68□□□□□ -1.02
SMG1-206ENST00000562668 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
SMG1-206ENST00000562668 GRIK5Q16478 980 aa8.68□□□□□ -1.02
SMG1-206ENST00000562668 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
SMG1-206ENST00000562668 ILDR2Q71H61 639 aa8.68□□□□□ -1.02
SMG1-206ENST00000562668 DMRTC2Q8IXT2 367 aaPredicted RBP8.68□□□□□ -1.02
SMG1-206ENST00000562668 FMR1NBQ8N0W7 255 aaPredicted RBP8.68□□□□□ -1.02
SMG1-206ENST00000562668 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
SMG1-206ENST00000562668 SELPP16109 830 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 PLAURQ03405 335 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 MBTPS1Q14703 1052 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 RSPO4Q2I0M5 234 aaPredicted RBP8.67□□□□□ -1.02
SMG1-206ENST00000562668 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 TTC9Q92623 222 aa8.67□□□□□ -1.02
SMG1-206ENST00000562668 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 MMP20O60882 483 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 PSAPP07602 524 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
SMG1-206ENST00000562668 SOX18P35713 384 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 SMG9Q9H0W8 520 aaKnown RBP8.66□□□□□ -1.02
SMG1-206ENST00000562668 SEMA6BQ9H3T3 888 aa8.66□□□□□ -1.02
SMG1-206ENST00000562668 ITGB7P26010 798 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 NRG1Q02297 640 aaPredicted RBP8.65□□□□□ -1.02
SMG1-206ENST00000562668 NAA30Q147X3 362 aaPredicted RBP8.65□□□□□ -1.02
SMG1-206ENST00000562668 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 WFDC8Q8IUA0 241 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
SMG1-206ENST00000562668 FAM13BQ9NYF5 915 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 SLAIN2Q9P270 581 aa8.65□□□□□ -1.02
SMG1-206ENST00000562668 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 ZAP70P43403 619 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 TXNRD3Q86VQ6 643 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 NLRP13Q86W25 1043 aa8.64□□□□□ -1.03
SMG1-206ENST00000562668 NSUN5Q96P11 429 aaKnown RBP8.64□□□□□ -1.03
SMG1-206ENST00000562668 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
SMG1-206ENST00000562668 ABTB2Q8N961 1025 aa8.63□□□□□ -1.03
SMG1-206ENST00000562668 PIK3R5Q8WYR1 880 aa8.63□□□□□ -1.03
SMG1-206ENST00000562668 PLD4Q96BZ4 506 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms