RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 MPNDQ8N594 471 aa24.43■■□□□ 1.5
KATNB1-202ENST00000562542 RTFDC1Q9BY42 306 aaPredicted RBP24.43■■□□□ 1.5
KATNB1-202ENST00000562542 CNOT7Q9UIV1 285 aaKnown RBP24.43■■□□□ 1.5
KATNB1-202ENST00000562542 PDE4DIPQ5VU43 2346 aa24.43■■□□□ 1.5
KATNB1-202ENST00000562542 PNISRQ8TF01 805 aaKnown RBP24.42■■□□□ 1.5
KATNB1-202ENST00000562542 KIAA2012Q0VF49 1180 aa24.41■■□□□ 1.5
KATNB1-202ENST00000562542 PARP10Q53GL7 1025 aa24.41■■□□□ 1.5
KATNB1-202ENST00000562542 GIGYF2Q6Y7W6 1299 aaKnown RBP24.41■■□□□ 1.5
KATNB1-202ENST00000562542 UTP14AQ9BVJ6 771 aaKnown RBP24.41■■□□□ 1.5
KATNB1-202ENST00000562542 SHTN1A0MZ66 631 aa24.4■■□□□ 1.5
KATNB1-202ENST00000562542 RGMBQ6NW40 437 aa24.4■■□□□ 1.5
KATNB1-202ENST00000562542 MICALL2Q8IY33 904 aa24.4■■□□□ 1.5
KATNB1-202ENST00000562542 BBOX1O75936 387 aa24.39■■□□□ 1.49
KATNB1-202ENST00000562542 DLK2Q6UY11 383 aa24.39■■□□□ 1.49
KATNB1-202ENST00000562542 SP8Q8IXZ3 490 aa24.39■■□□□ 1.49
KATNB1-202ENST00000562542 SAGE1Q9NXZ1 904 aa24.39■■□□□ 1.49
KATNB1-202ENST00000562542 EIF4A1P60842 406 aaKnown RBP24.38■■□□□ 1.49
KATNB1-202ENST00000562542 KRT26Q7Z3Y9 468 aa24.38■■□□□ 1.49
KATNB1-202ENST00000562542 C2orf69Q8N8R5 385 aa24.38■■□□□ 1.49
KATNB1-202ENST00000562542 GBA2Q9HCG7 927 aaPredicted RBP24.38■■□□□ 1.49
KATNB1-202ENST00000562542 TRPA1O75762 1119 aa24.37■■□□□ 1.49
KATNB1-202ENST00000562542 NEFMP07197 916 aa24.37■■□□□ 1.49
KATNB1-202ENST00000562542 KIF23Q02241 960 aaPredicted RBP24.37■■□□□ 1.49
KATNB1-202ENST00000562542 CCDC102AQ96A19 550 aa24.37■■□□□ 1.49
KATNB1-202ENST00000562542 ZNF157P51786 506 aaPredicted RBP24.36■■□□□ 1.49
KATNB1-202ENST00000562542 SLC10A5Q5PT55 438 aa24.36■■□□□ 1.49
KATNB1-202ENST00000562542 SAMD7Q7Z3H4 446 aa24.36■■□□□ 1.49
KATNB1-202ENST00000562542 ZBTB12Q9Y330 459 aaPredicted RBP24.36■■□□□ 1.49
KATNB1-202ENST00000562542 YDJCA8MPS7 323 aa24.35■■□□□ 1.49
KATNB1-202ENST00000562542 FAM155AB1AL88 458 aaPredicted RBP24.35■■□□□ 1.49
KATNB1-202ENST00000562542 PRPF38BQ5VTL8 546 aaKnown RBP24.35■■□□□ 1.49
KATNB1-202ENST00000562542 DDX46Q7L014 1031 aaKnown RBP24.35■■□□□ 1.49
KATNB1-202ENST00000562542 RNF186Q9NXI6 227 aa24.35■■□□□ 1.49
KATNB1-202ENST00000562542 TBC1D10BQ4KMP7 808 aaPredicted RBP24.34■■□□□ 1.49
KATNB1-202ENST00000562542 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
KATNB1-202ENST00000562542 DCPSQ96C86 337 aaKnown RBP24.34■■□□□ 1.49
KATNB1-202ENST00000562542 KDM3BQ7LBC6 1761 aa24.34■■□□□ 1.49
KATNB1-202ENST00000562542 HCLS1P14317 486 aaPredicted RBP24.33■■□□□ 1.49
KATNB1-202ENST00000562542 RBM26Q5T8P6 1007 aaKnown RBP24.33■■□□□ 1.49
KATNB1-202ENST00000562542 THUMPD2Q9BTF0 503 aaKnown RBP24.33■■□□□ 1.49
KATNB1-202ENST00000562542 ERBB4Q15303 1308 aa24.33■■□□□ 1.48
KATNB1-202ENST00000562542 ADM5C9JUS6 153 aa24.32■■□□□ 1.48
KATNB1-202ENST00000562542 PSMD14O00487 310 aa24.31■■□□□ 1.48
KATNB1-202ENST00000562542 PPP2R1AP30153 589 aa24.31■■□□□ 1.48
KATNB1-202ENST00000562542 GRAPQ13588 217 aa24.31■■□□□ 1.48
KATNB1-202ENST00000562542 CTU1Q7Z7A3 348 aaKnown RBP24.31■■□□□ 1.48
KATNB1-202ENST00000562542 GRAPLQ8TC17 118 aaPredicted RBP24.31■■□□□ 1.48
KATNB1-202ENST00000562542 DPF2Q92785 391 aa24.31■■□□□ 1.48
KATNB1-202ENST00000562542 EIF2S2P20042 333 aaKnown RBP24.29■■□□□ 1.48
KATNB1-202ENST00000562542 WASHC4Q2M389 1173 aa24.29■■□□□ 1.48
KATNB1-202ENST00000562542 DBNDD1Q9H9R9 158 aa24.29■■□□□ 1.48
KATNB1-202ENST00000562542 EGFRP00533 1210 aa24.28■■□□□ 1.48
KATNB1-202ENST00000562542 TRMT112Q9UI30 125 aaKnown RBP24.28■■□□□ 1.48
KATNB1-202ENST00000562542 RIMBP2O15034 1052 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 SLC10A3P09131 477 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 HSP90AB3PQ58FF7 597 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 CSRNP1Q96S65 589 aa24.27■■□□□ 1.48
KATNB1-202ENST00000562542 LAMB2P55268 1798 aa24.26■■□□□ 1.47
KATNB1-202ENST00000562542 ANXA1P04083 346 aa24.26■■□□□ 1.47
KATNB1-202ENST00000562542 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
KATNB1-202ENST00000562542 NLRP10Q86W26 655 aa24.26■■□□□ 1.47
KATNB1-202ENST00000562542 NSFL1CQ9UNZ2 370 aaKnown RBP24.26■■□□□ 1.47
KATNB1-202ENST00000562542 DUOX1Q9NRD9 1551 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 ANKRD36CQ5JPF3 1778 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 C6orf229H3BNL8 230 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 TSPYL4Q9UJ04 414 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 HPS5Q9UPZ3 1129 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 SH3TC1Q8TE82 1336 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 AKAP11Q9UKA4 1901 aa24.25■■□□□ 1.47
KATNB1-202ENST00000562542 AIMP1Q12904 312 aaKnown RBP24.24■■□□□ 1.47
KATNB1-202ENST00000562542 PROSER3Q2NL68 480 aa24.24■■□□□ 1.47
KATNB1-202ENST00000562542 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
KATNB1-202ENST00000562542 LRP10Q7Z4F1 713 aa24.24■■□□□ 1.47
KATNB1-202ENST00000562542 GGA3Q9NZ52 723 aa24.24■■□□□ 1.47
KATNB1-202ENST00000562542 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
KATNB1-202ENST00000562542 PDIA6Q15084 440 aa24.23■■□□□ 1.47
KATNB1-202ENST00000562542 ZNF428Q96B54 188 aa24.23■■□□□ 1.47
KATNB1-202ENST00000562542 HDAC9Q9UKV0 1011 aa24.23■■□□□ 1.47
KATNB1-202ENST00000562542 ECE2O60344 883 aa24.22■■□□□ 1.47
KATNB1-202ENST00000562542 NFE2L2Q16236 605 aa24.22■■□□□ 1.47
KATNB1-202ENST00000562542 DOK7Q18PE1 504 aa24.22■■□□□ 1.47
KATNB1-202ENST00000562542 REM2Q8IYK8 340 aaPredicted RBP24.22■■□□□ 1.47
KATNB1-202ENST00000562542 COPS6Q7L5N1 327 aa24.21■■□□□ 1.47
KATNB1-202ENST00000562542 NECTIN2Q92692 538 aa24.21■■□□□ 1.47
KATNB1-202ENST00000562542 CDCA5Q96FF9 252 aa24.21■■□□□ 1.47
KATNB1-202ENST00000562542 KCNQ5Q9NR82 932 aa24.21■■□□□ 1.47
KATNB1-202ENST00000562542 TAF1P21675 1872 aa24.2■■□□□ 1.46
KATNB1-202ENST00000562542 TCIRG1Q13488 830 aa24.2■■□□□ 1.46
KATNB1-202ENST00000562542 RASAL3Q86YV0 1011 aa24.2■■□□□ 1.46
KATNB1-202ENST00000562542 XAGE3Q8WTP9 111 aa24.2■■□□□ 1.46
KATNB1-202ENST00000562542 EYA3Q99504 573 aa24.2■■□□□ 1.46
KATNB1-202ENST00000562542 POLR2AP24928 1970 aaKnown RBP24.2■■□□□ 1.46
KATNB1-202ENST00000562542 RTL9Q8NET4 1388 aa24.19■■□□□ 1.46
KATNB1-202ENST00000562542 LRRC37AA6NMS7 1700 aa24.19■■□□□ 1.46
KATNB1-202ENST00000562542 MAPK8IP3Q9UPT6 1336 aa24.19■■□□□ 1.46
KATNB1-202ENST00000562542 PKN2Q16513 984 aaKnown RBP24.19■■□□□ 1.46
KATNB1-202ENST00000562542 POLLQ9UGP5 575 aa24.19■■□□□ 1.46
KATNB1-202ENST00000562542 ASTN2O75129 1339 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms