RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
RPAP1-204ENST00000562303 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 MICALCLQ6ZW33 695 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 POLD1P28340 1107 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
RPAP1-204ENST00000562303 SPAG5Q96R06 1193 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 B4DLN1 442 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 SSFA2P28290 1259 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 MRPL12P52815 198 aaKnown RBP12.86□□□□□ -0.35
RPAP1-204ENST00000562303 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
RPAP1-204ENST00000562303 ESR2Q92731 530 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 N4BP3O15049 544 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 STAT6P42226 847 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
RPAP1-204ENST00000562303 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 AKR1B10O60218 316 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 MRVI1Q9Y6F6 885 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 NEMFO60524 1076 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 TOM1O60784 492 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
RPAP1-204ENST00000562303 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
RPAP1-204ENST00000562303 ANXA1P04083 346 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 NAA16Q6N069 864 aaPredicted RBP12.85□□□□□ -0.35
RPAP1-204ENST00000562303 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 CALM1P0DP23 149 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 CALM2P0DP24 149 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 CALM3P0DP25 149 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 ZBTB43O43298 467 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
RPAP1-204ENST00000562303 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
RPAP1-204ENST00000562303 AFMP43652 599 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 MSH6P52701 1360 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 NAPAP54920 295 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 DDX12PQ92771 950 aa12.85□□□□□ -0.35
RPAP1-204ENST00000562303 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPAP1-204ENST00000562303 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
RPAP1-204ENST00000562303 TAF12Q16514 161 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 C6orf50Q9HD87 102 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
RPAP1-204ENST00000562303 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 GNAQP50148 359 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 RTN1Q16799 776 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 RAB3IL1Q8TBN0 382 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 CNNM2Q9H8M5 875 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 SPECC1LQ69YQ0 1117 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 C6orf163Q5TEZ5 329 aa12.84□□□□□ -0.35
RPAP1-204ENST00000562303 C16orf45Q96MC5 204 aaPredicted RBP12.84□□□□□ -0.35
RPAP1-204ENST00000562303 GOLGA6L9A6NEM1 432 aa12.83□□□□□ -0.35
RPAP1-204ENST00000562303 ZFYP08048 801 aaPredicted RBP12.83□□□□□ -0.35
RPAP1-204ENST00000562303 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.35
RPAP1-204ENST00000562303 CEP112Q8N8E3 955 aa12.83□□□□□ -0.35
RPAP1-204ENST00000562303 NESP48681 1621 aa12.83□□□□□ -0.35
RPAP1-204ENST00000562303 TRIM27P14373 513 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
RPAP1-204ENST00000562303 ACEP12821 1306 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 BMP15O95972 392 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 GJC1P36383 396 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 SYKP43405 635 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 IQCGQ9H095 443 aaKnown RBP12.83□□□□□ -0.36
RPAP1-204ENST00000562303 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
RPAP1-204ENST00000562303 NDC80O14777 642 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 BRF1Q92994 677 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 CCDC155Q8N6L0 562 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.36
RPAP1-204ENST00000562303 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 IDI1Q13907 227 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms