RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 DOT1LQ8TEK3 1739 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 PI4KAP2A4QPH2 592 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 RGS3P49796 1198 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 VPS72Q15906 364 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 SLC4A10Q6U841 1118 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 PI4KAP1Q8N8J0 262 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
CAPN3-210ENST00000561817 DNAAF4Q8WXU2 420 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 GCC1Q96CN9 775 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-210ENST00000561817 FMNL2Q96PY5 1086 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 RABGEF1Q9UJ41 708 aa8.19□□□□□ -1.1
CAPN3-210ENST00000561817 THRAP3Q9Y2W1 955 aaKnown RBP8.19□□□□□ -1.1
CAPN3-210ENST00000561817 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 FAM161AQ3B820 660 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
CAPN3-210ENST00000561817 KSR2Q6VAB6 950 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 BARGINQ6ZT62 677 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
CAPN3-210ENST00000561817 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 PIGBQ92521 554 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-210ENST00000561817 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 BCL9O00512 1426 aa8.18□□□□□ -1.1
CAPN3-210ENST00000561817 ALDH1L1O75891 902 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 GNAI2P04899 355 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 GNAI3P08754 354 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 COL9A1P20849 921 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 PROX2Q3B8N5 592 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 CHD1LQ86WJ1 897 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 TTC5Q8N0Z6 440 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 SRCIN1Q9C0H9 1055 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 UTYO14607 1347 aa8.17□□□□□ -1.1
CAPN3-210ENST00000561817 IGKV5-2P06315 115 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 NUP188Q5SRE5 1749 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 SEPT12Q8IYM1 358 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 TNS1Q9HBL0 1735 aaKnown RBP8.16□□□□□ -1.1
CAPN3-210ENST00000561817 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 MAP3K2Q9Y2U5 619 aa8.16□□□□□ -1.1
CAPN3-210ENST00000561817 ARFGEF2Q9Y6D5 1785 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 EXOC5O00471 708 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 NBPF7P0C2Y1 421 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-210ENST00000561817 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 COPS6Q7L5N1 327 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-210ENST00000561817 LINS1Q8NG48 757 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 SSH3Q8TE77 659 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 SLC4A9Q96Q91 983 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 TMOD3Q9NYL9 352 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 ASAP1Q9ULH1 1129 aa8.15□□□□□ -1.1
CAPN3-210ENST00000561817 LRRFIP2Q9Y608 721 aaKnown RBP8.15□□□□□ -1.1
CAPN3-210ENST00000561817 TJP1Q07157 1748 aa8.15□□□□□ -1.11
CAPN3-210ENST00000561817 CICQ96RK0 1608 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-210ENST00000561817 SALL3Q9BXA9 1300 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 ONECUT3O60422 494 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-210ENST00000561817 UBTFL1P0CB47 393 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-210ENST00000561817 PIP4K2AP48426 406 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-210ENST00000561817 MTX1Q13505 466 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 ANKRD45Q5TZF3 282 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 LAPTM4BQ86VI4 370 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 ANKK1Q8NFD2 765 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 KAZALD1Q96I82 304 aa8.14□□□□□ -1.11
CAPN3-210ENST00000561817 METTL22Q9BUU2 404 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-210ENST00000561817 COL15A1P39059 1388 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 BTAF1O14981 1849 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
CAPN3-210ENST00000561817 HMMRO75330 724 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
CAPN3-210ENST00000561817 A1BGP04217 495 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 MYL6BP14649 208 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 DDB1Q16531 1140 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 CWF19L2Q2TBE0 894 aaKnown RBP8.13□□□□□ -1.11
CAPN3-210ENST00000561817 KRT27Q7Z3Y8 459 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 DDX12PQ92771 950 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 NHSQ6T4R5 1651 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 RREB1Q92766 1687 aa8.13□□□□□ -1.11
CAPN3-210ENST00000561817 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 CASP7P55210 303 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 AIMP1Q12904 312 aaKnown RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 GCKRQ14397 625 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 BMP2KLQ5H9B9 411 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 IFFO2Q5TF58 517 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 TTLL7Q6ZT98 887 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 PPP1R42Q7Z4L9 355 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 DNAJC10Q8IXB1 793 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 C16orf71Q8IYS4 520 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms