RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 HMMRO75330 724 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 FAM161AQ3B820 660 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 SGIP1Q9BQI5 828 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 PPP1R1BQ9UD71 204 aaPredicted RBP29.06■■■□□ 2.24
TMEM249-201ENST00000561638 ATP8B2P98198 1209 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 CCDC57Q2TAC2 916 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 GREM2Q9H772 168 aa29.06■■■□□ 2.24
TMEM249-201ENST00000561638 TNRC6CQ9HCJ0 1690 aaKnown RBP29.06■■■□□ 2.24
TMEM249-201ENST00000561638 PNMA6EA0A0J9YXQ4 647 aa29.05■■■□□ 2.24
TMEM249-201ENST00000561638 CSF1RP07333 972 aa29.05■■■□□ 2.24
TMEM249-201ENST00000561638 MTX1Q13505 466 aa29.05■■■□□ 2.24
TMEM249-201ENST00000561638 SF3B3Q15393 1217 aaKnown RBP29.05■■■□□ 2.24
TMEM249-201ENST00000561638 KLHL34Q8N239 644 aa29.05■■■□□ 2.24
TMEM249-201ENST00000561638 RPGRQ92834 1020 aaKnown RBP29.05■■■□□ 2.24
TMEM249-201ENST00000561638 IFIT5Q13325 482 aaKnown RBP29.04■■■□□ 2.24
TMEM249-201ENST00000561638 C10orf71Q711Q0 1435 aa29.04■■■□□ 2.24
TMEM249-201ENST00000561638 ITGA6P23229 1130 aa29.02■■■□□ 2.24
TMEM249-201ENST00000561638 TAF7LQ5H9L4 462 aa29.02■■■□□ 2.24
TMEM249-201ENST00000561638 SIRT2Q8IXJ6 389 aa29.02■■■□□ 2.24
TMEM249-201ENST00000561638 ANKRD18BA2A2Z9 1011 aa29.01■■■□□ 2.23
TMEM249-201ENST00000561638 DDX46Q7L014 1031 aaKnown RBP29.01■■■□□ 2.23
TMEM249-201ENST00000561638 CRY2Q49AN0 593 aa29.01■■■□□ 2.23
TMEM249-201ENST00000561638 ANKRD31Q8N7Z5 1873 aa29■■■□□ 2.23
TMEM249-201ENST00000561638 H0YIN7 160 aa29■■■□□ 2.23
TMEM249-201ENST00000561638 CCDC136Q96JN2 1154 aa29■■■□□ 2.23
TMEM249-201ENST00000561638 KLRG2A4D1S0 409 aaPredicted RBP28.99■■■□□ 2.23
TMEM249-201ENST00000561638 C2CD5Q86YS7 1000 aa28.99■■■□□ 2.23
TMEM249-201ENST00000561638 SSH3Q8TE77 659 aa28.99■■■□□ 2.23
TMEM249-201ENST00000561638 RWDD1Q9H446 243 aaPredicted RBP28.99■■■□□ 2.23
TMEM249-201ENST00000561638 PPP4R2Q9NY27 417 aa28.99■■■□□ 2.23
TMEM249-201ENST00000561638 SEC31BQ9NQW1 1179 aa28.98■■■□□ 2.23
TMEM249-201ENST00000561638 RTL9Q8NET4 1388 aa28.98■■■□□ 2.23
TMEM249-201ENST00000561638 POLA2Q14181 598 aa28.98■■■□□ 2.23
TMEM249-201ENST00000561638 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
TMEM249-201ENST00000561638 CDC5LQ99459 802 aaKnown RBP28.98■■■□□ 2.23
TMEM249-201ENST00000561638 SRGNP10124 158 aa28.97■■■□□ 2.23
TMEM249-201ENST00000561638 KLHDC4Q8TBB5 520 aa28.97■■■□□ 2.23
TMEM249-201ENST00000561638 PDZRN3Q9UPQ7 1066 aa28.97■■■□□ 2.23
TMEM249-201ENST00000561638 HDAC1Q13547 482 aaPredicted RBP28.96■■■□□ 2.23
TMEM249-201ENST00000561638 NPR1P16066 1061 aa28.96■■■□□ 2.23
TMEM249-201ENST00000561638 CHRNA5P30532 468 aa28.96■■■□□ 2.23
TMEM249-201ENST00000561638 ZNF594Q96JF6 807 aaPredicted RBP28.96■■■□□ 2.23
TMEM249-201ENST00000561638 ZNF622Q969S3 477 aaKnown RBP eCLIP28.95■■■□□ 2.22
TMEM249-201ENST00000561638 MASTLQ96GX5 879 aa28.95■■■□□ 2.22
TMEM249-201ENST00000561638 SIL1Q9H173 461 aa28.95■■■□□ 2.22
TMEM249-201ENST00000561638 PA2G4Q9UQ80 394 aaKnown RBP28.95■■■□□ 2.22
TMEM249-201ENST00000561638 CD2APQ9Y5K6 639 aa28.95■■■□□ 2.22
TMEM249-201ENST00000561638 SURF6O75683 361 aaKnown RBP28.94■■■□□ 2.22
TMEM249-201ENST00000561638 IGHMBP2P38935 993 aaKnown RBP28.94■■■□□ 2.22
TMEM249-201ENST00000561638 ANKRD18AQ8IVF6 992 aa28.94■■■□□ 2.22
TMEM249-201ENST00000561638 MPHOSPH8Q99549 860 aa28.94■■■□□ 2.22
TMEM249-201ENST00000561638 RFX5P48382 616 aaPredicted RBP28.93■■■□□ 2.22
TMEM249-201ENST00000561638 OS9Q13438 667 aaPredicted RBP28.93■■■□□ 2.22
TMEM249-201ENST00000561638 B4GALNT3Q6L9W6 998 aa28.93■■■□□ 2.22
TMEM249-201ENST00000561638 HOXA10P31260 410 aaPredicted RBP28.93■■■□□ 2.22
TMEM249-201ENST00000561638 PTPN12Q05209 780 aaKnown RBP28.93■■■□□ 2.22
TMEM249-201ENST00000561638 TGFB2P61812 414 aa28.92■■■□□ 2.22
TMEM249-201ENST00000561638 CELF1Q92879 486 aaKnown RBP28.92■■■□□ 2.22
TMEM249-201ENST00000561638 COPRSQ9NQ92 184 aa28.92■■■□□ 2.22
TMEM249-201ENST00000561638 COL11A2P13942 1736 aaPredicted RBP28.91■■■□□ 2.22
TMEM249-201ENST00000561638 SRCAPQ6ZRS2 3230 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 IGHDP01880 384 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 GRAPQ13588 217 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 LDHAL6AQ6ZMR3 332 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 GRAPLQ8TC17 118 aaPredicted RBP28.91■■■□□ 2.22
TMEM249-201ENST00000561638 EXOC6BQ9Y2D4 811 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 KIF13BQ9NQT8 1826 aa28.91■■■□□ 2.22
TMEM249-201ENST00000561638 A0A0G2JLW4 131 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 ALDH1B1P30837 517 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 RPS8P62241 208 aaKnown RBP28.9■■■□□ 2.22
TMEM249-201ENST00000561638 CRAMP1Q96RY5 1269 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 CNNM1Q9NRU3 951 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 DPEP1P16444 411 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 G3BP1Q13283 466 aaKnown RBP eCLIP28.9■■■□□ 2.22
TMEM249-201ENST00000561638 STYK1Q6J9G0 422 aa28.9■■■□□ 2.22
TMEM249-201ENST00000561638 APBB1O00213 710 aa28.88■■■□□ 2.21
TMEM249-201ENST00000561638 HSP90AB4PQ58FF6 505 aa28.88■■■□□ 2.21
TMEM249-201ENST00000561638 CNKSR1Q969H4 720 aa28.88■■■□□ 2.21
TMEM249-201ENST00000561638 DCTPP1Q9H773 170 aa28.88■■■□□ 2.21
TMEM249-201ENST00000561638 TAF1P21675 1872 aa28.87■■■□□ 2.21
TMEM249-201ENST00000561638 EYA2O00167 538 aa28.87■■■□□ 2.21
TMEM249-201ENST00000561638 FHDC1Q9C0D6 1143 aaPredicted RBP28.87■■■□□ 2.21
TMEM249-201ENST00000561638 GCC1Q96CN9 775 aa28.86■■■□□ 2.21
TMEM249-201ENST00000561638 PUS3Q9BZE2 481 aaKnown RBP28.86■■■□□ 2.21
TMEM249-201ENST00000561638 NOP58Q9Y2X3 529 aaKnown RBP28.86■■■□□ 2.21
TMEM249-201ENST00000561638 BBOX1O75936 387 aa28.85■■■□□ 2.21
TMEM249-201ENST00000561638 BSDC1Q9NW68 430 aaPredicted RBP28.85■■■□□ 2.21
TMEM249-201ENST00000561638 FBXO3Q9UK99 471 aa28.85■■■□□ 2.21
TMEM249-201ENST00000561638 LRRC24Q50LG9 513 aa28.85■■■□□ 2.21
TMEM249-201ENST00000561638 COL4A1P02462 1669 aa28.84■■■□□ 2.21
TMEM249-201ENST00000561638 SPEF2Q9C093 1822 aa28.84■■■□□ 2.21
TMEM249-201ENST00000561638 PPEF1O14829 653 aaPredicted RBP28.84■■■□□ 2.21
TMEM249-201ENST00000561638 CIAO1O76071 339 aa28.84■■■□□ 2.21
TMEM249-201ENST00000561638 BCL11AQ9H165 835 aa28.84■■■□□ 2.21
TMEM249-201ENST00000561638 IL15P40933 162 aaPredicted RBP28.83■■■□□ 2.21
TMEM249-201ENST00000561638 PRPF40BQ6NWY9 871 aaKnown RBP28.83■■■□□ 2.21
TMEM249-201ENST00000561638 ERC1Q8IUD2 1116 aa28.83■■■□□ 2.21
TMEM249-201ENST00000561638 TMX4Q9H1E5 349 aaPredicted RBP28.83■■■□□ 2.21
TMEM249-201ENST00000561638 PIM2Q9P1W9 311 aa28.83■■■□□ 2.21
TMEM249-201ENST00000561638 ZBTB47Q9UFB7 747 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms