RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CYP4F22Q6NT55 531 aa32.81■■■□□ 2.84
NME3-202ENST00000561637 TRAF5O00463 557 aa32.8■■■□□ 2.84
NME3-202ENST00000561637 ANP32CO43423 234 aa32.8■■■□□ 2.84
NME3-202ENST00000561637 GRM1Q13255 1194 aa32.8■■■□□ 2.84
NME3-202ENST00000561637 CC2D2BQ6DHV5 1058 aa32.8■■■□□ 2.84
NME3-202ENST00000561637 PAXIP1Q6ZW49 1069 aaPredicted RBP32.8■■■□□ 2.84
NME3-202ENST00000561637 TSR2Q969E8 191 aaKnown RBP32.8■■■□□ 2.84
NME3-202ENST00000561637 LAMB2P55268 1798 aa32.79■■■□□ 2.84
NME3-202ENST00000561637 HSP90AB3PQ58FF7 597 aa32.79■■■□□ 2.84
NME3-202ENST00000561637 SLC10A5Q5PT55 438 aa32.79■■■□□ 2.84
NME3-202ENST00000561637 PLBD2Q8NHP8 589 aa32.79■■■□□ 2.84
NME3-202ENST00000561637 ATP5J2-PTCD1G3V325 749 aa32.78■■■□□ 2.84
NME3-202ENST00000561637 CALD1Q05682 793 aaKnown RBP32.78■■■□□ 2.84
NME3-202ENST00000561637 LARGE2Q8N3Y3 721 aa32.78■■■□□ 2.84
NME3-202ENST00000561637 TSPYL6Q8N831 410 aa32.78■■■□□ 2.84
NME3-202ENST00000561637 GPR101Q96P66 508 aaPredicted RBP32.78■■■□□ 2.84
NME3-202ENST00000561637 PHAXQ9H814 394 aaKnown RBP32.78■■■□□ 2.84
NME3-202ENST00000561637 ANKRD13DQ6ZTN6 518 aa32.77■■■□□ 2.84
NME3-202ENST00000561637 RBM17Q96I25 401 aaKnown RBP32.77■■■□□ 2.84
NME3-202ENST00000561637 TRMT112Q9UI30 125 aaKnown RBP32.77■■■□□ 2.84
NME3-202ENST00000561637 NLRP3Q96P20 1036 aa32.76■■■□□ 2.83
NME3-202ENST00000561637 CRAMP1Q96RY5 1269 aa32.76■■■□□ 2.83
NME3-202ENST00000561637 HYPKQ9NX55 129 aa32.76■■■□□ 2.83
NME3-202ENST00000561637 PPEF1O14829 653 aaPredicted RBP32.75■■■□□ 2.83
NME3-202ENST00000561637 ECE1P42892 770 aa32.75■■■□□ 2.83
NME3-202ENST00000561637 ISCA1Q9BUE6 129 aa32.75■■■□□ 2.83
NME3-202ENST00000561637 TSKSQ9UJT2 592 aa32.75■■■□□ 2.83
NME3-202ENST00000561637 ABCC4O15439 1325 aa32.75■■■□□ 2.83
NME3-202ENST00000561637 CCDC85CA6NKD9 419 aa32.74■■■□□ 2.83
NME3-202ENST00000561637 USP50Q70EL3 339 aaPredicted RBP32.74■■■□□ 2.83
NME3-202ENST00000561637 WWC1Q8IX03 1113 aa32.74■■■□□ 2.83
NME3-202ENST00000561637 AOC2O75106 756 aa32.73■■■□□ 2.83
NME3-202ENST00000561637 TLL2Q9Y6L7 1015 aa32.73■■■□□ 2.83
NME3-202ENST00000561637 BEGAINQ9BUH8 593 aa32.72■■■□□ 2.83
NME3-202ENST00000561637 CASP8AP2Q9UKL3 1982 aa32.72■■■□□ 2.83
NME3-202ENST00000561637 SH3TC1Q8TE82 1336 aa32.72■■■□□ 2.83
NME3-202ENST00000561637 SALL2Q9Y467 1007 aaPredicted RBP32.71■■■□□ 2.83
NME3-202ENST00000561637 TAF1P21675 1872 aa32.7■■■□□ 2.83
NME3-202ENST00000561637 RTL5Q5HYW3 569 aaPredicted RBP32.7■■■□□ 2.83
NME3-202ENST00000561637 NIM1KQ8IY84 436 aa32.7■■■□□ 2.83
NME3-202ENST00000561637 FAM89AQ96GI7 184 aa32.7■■■□□ 2.83
NME3-202ENST00000561637 DDX60Q8IY21 1712 aaKnown RBP32.7■■■□□ 2.83
NME3-202ENST00000561637 CCDC27Q2M243 656 aa32.69■■■□□ 2.82
NME3-202ENST00000561637 GRIPAP1Q4V328 841 aa32.69■■■□□ 2.82
NME3-202ENST00000561637 PPIP5K2O43314 1243 aa32.68■■■□□ 2.82
NME3-202ENST00000561637 AOC3Q16853 763 aa32.68■■■□□ 2.82
NME3-202ENST00000561637 COL4A1P02462 1669 aa32.68■■■□□ 2.82
NME3-202ENST00000561637 RGS19P49795 217 aa32.67■■■□□ 2.82
NME3-202ENST00000561637 MLLT1Q03111 559 aaPredicted RBP32.67■■■□□ 2.82
NME3-202ENST00000561637 GPRC5DQ9NZD1 345 aa32.67■■■□□ 2.82
NME3-202ENST00000561637 RIC3Q7Z5B4 369 aa32.66■■■□□ 2.82
NME3-202ENST00000561637 ADARB2Q9NS39 739 aaKnown RBP32.66■■■□□ 2.82
NME3-202ENST00000561637 MAP2K2P36507 400 aa32.65■■■□□ 2.82
NME3-202ENST00000561637 GOLGA2Q08379 1002 aa32.65■■■□□ 2.82
NME3-202ENST00000561637 CXCL9Q07325 125 aa32.64■■■□□ 2.82
NME3-202ENST00000561637 SAPCD2Q86UD0 394 aa32.64■■■□□ 2.82
NME3-202ENST00000561637 MYD88Q99836 296 aa32.64■■■□□ 2.82
NME3-202ENST00000561637 ATP6V0A2Q9Y487 856 aa32.64■■■□□ 2.82
NME3-202ENST00000561637 CELF2O95319 508 aaKnown RBP32.63■■■□□ 2.81
NME3-202ENST00000561637 GLIS2Q9BZE0 524 aaPredicted RBP32.63■■■□□ 2.81
NME3-202ENST00000561637 CCDC30Q5VVM6 783 aa32.62■■■□□ 2.81
NME3-202ENST00000561637 JARID2Q92833 1246 aaPredicted RBP32.62■■■□□ 2.81
NME3-202ENST00000561637 GMPSP49915 693 aaPredicted RBP32.6■■■□□ 2.81
NME3-202ENST00000561637 TRIM28Q13263 835 aaKnown RBP32.6■■■□□ 2.81
NME3-202ENST00000561637 GRAPQ13588 217 aa32.6■■■□□ 2.81
NME3-202ENST00000561637 DDX46Q7L014 1031 aaKnown RBP32.6■■■□□ 2.81
NME3-202ENST00000561637 FAM9BQ8IZU0 186 aa32.6■■■□□ 2.81
NME3-202ENST00000561637 GRAPLQ8TC17 118 aaPredicted RBP32.6■■■□□ 2.81
NME3-202ENST00000561637 FANCIQ9NVI1 1328 aa32.59■■■□□ 2.81
NME3-202ENST00000561637 G2E3Q7L622 706 aa32.59■■■□□ 2.81
NME3-202ENST00000561637 MCOLN1Q9GZU1 580 aa32.59■■■□□ 2.81
NME3-202ENST00000561637 ZNRF3Q9ULT6 936 aa32.59■■■□□ 2.81
NME3-202ENST00000561637 IL16Q14005 1332 aa32.58■■■□□ 2.81
NME3-202ENST00000561637 IRS4O14654 1257 aaPredicted RBP32.58■■■□□ 2.81
NME3-202ENST00000561637 TWISTNBQ3B726 338 aaPredicted RBP32.58■■■□□ 2.81
NME3-202ENST00000561637 PGAP2Q9UHJ9 254 aa32.58■■■□□ 2.81
NME3-202ENST00000561637 HIRAP54198 1017 aaPredicted RBP32.57■■■□□ 2.8
NME3-202ENST00000561637 CELF1Q92879 486 aaKnown RBP32.57■■■□□ 2.8
NME3-202ENST00000561637 VPS33BQ9H267 617 aa32.57■■■□□ 2.8
NME3-202ENST00000561637 SPINK5Q9NQ38 1064 aaPredicted RBP32.57■■■□□ 2.8
NME3-202ENST00000561637 BBOX1O75936 387 aa32.56■■■□□ 2.8
NME3-202ENST00000561637 RTFDC1Q9BY42 306 aaPredicted RBP32.56■■■□□ 2.8
NME3-202ENST00000561637 MAP3K2Q9Y2U5 619 aa32.56■■■□□ 2.8
NME3-202ENST00000561637 SF3B3Q15393 1217 aaKnown RBP32.55■■■□□ 2.8
NME3-202ENST00000561637 SP8Q8IXZ3 490 aa32.55■■■□□ 2.8
NME3-202ENST00000561637 METTL22Q9BUU2 404 aaPredicted RBP32.55■■■□□ 2.8
NME3-202ENST00000561637 TNRC18O15417 2968 aaPredicted RBP32.55■■■□□ 2.8
NME3-202ENST00000561637 DUOX1Q9NRD9 1551 aa32.54■■■□□ 2.8
NME3-202ENST00000561637 HHIPL1Q96JK4 782 aa32.54■■■□□ 2.8
NME3-202ENST00000561637 ZNF408Q9H9D4 720 aa32.54■■■□□ 2.8
NME3-202ENST00000561637 POLR2AP24928 1970 aaKnown RBP32.53■■■□□ 2.8
NME3-202ENST00000561637 SHTN1A0MZ66 631 aa32.53■■■□□ 2.8
NME3-202ENST00000561637 BRPF1P55201 1214 aaPredicted RBP32.53■■■□□ 2.8
NME3-202ENST00000561637 NCBP3Q53F19 620 aaKnown RBP32.53■■■□□ 2.8
NME3-202ENST00000561637 CIAPIN1Q6FI81 312 aa32.53■■■□□ 2.8
NME3-202ENST00000561637 DPP8Q6V1X1 898 aaPredicted RBP32.53■■■□□ 2.8
NME3-202ENST00000561637 ZBTB38Q8NAP3 1195 aaPredicted RBP32.53■■■□□ 2.8
NME3-202ENST00000561637 TRPM4Q8TD43 1214 aa32.53■■■□□ 2.8
NME3-202ENST00000561637 ZIC5Q96T25 663 aa32.53■■■□□ 2.8
NME3-202ENST00000561637 TMX4Q9H1E5 349 aaPredicted RBP32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms