RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 GRAPLQ8TC17 118 aaPredicted RBP11□□□□□ -0.65
PALB2-202ENST00000561514 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
PALB2-202ENST00000561514 ZNRF3Q9ULT6 936 aa11□□□□□ -0.65
PALB2-202ENST00000561514 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
PALB2-202ENST00000561514 GJA3Q9Y6H8 435 aa11□□□□□ -0.65
PALB2-202ENST00000561514 SH3TC1Q8TE82 1336 aa11□□□□□ -0.65
PALB2-202ENST00000561514 HSPA8P11142 646 aaKnown RBP10.99□□□□□ -0.65
PALB2-202ENST00000561514 ISCA1Q9BUE6 129 aa10.99□□□□□ -0.65
PALB2-202ENST00000561514 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
PALB2-202ENST00000561514 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 MAP2K1Q02750 393 aaPredicted RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 KRT24Q2M2I5 525 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 CST9Q5W186 159 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 PLBD2Q8NHP8 589 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 ZC3H15Q8WU90 426 aaKnown RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 HHIPL1Q96JK4 782 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 CHPF2Q9P2E5 772 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 TRMT112Q9UI30 125 aaKnown RBP10.98□□□□□ -0.65
PALB2-202ENST00000561514 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
PALB2-202ENST00000561514 CAPN15O75808 1086 aa10.97□□□□□ -0.65
PALB2-202ENST00000561514 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
PALB2-202ENST00000561514 GMPSP49915 693 aaPredicted RBP10.97□□□□□ -0.65
PALB2-202ENST00000561514 FMR1Q06787 632 aaKnown RBP eCLIP10.97□□□□□ -0.65
PALB2-202ENST00000561514 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
PALB2-202ENST00000561514 DDX46Q7L014 1031 aaKnown RBP10.97□□□□□ -0.65
PALB2-202ENST00000561514 MPNDQ8N594 471 aa10.97□□□□□ -0.65
PALB2-202ENST00000561514 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
PALB2-202ENST00000561514 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
PALB2-202ENST00000561514 ANKRD36CQ5JPF3 1778 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 YDJCA8MPS7 323 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 TRAF5O00463 557 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 TCERG1O14776 1098 aaKnown RBP10.96□□□□□ -0.65
PALB2-202ENST00000561514 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 CIAPIN1Q6FI81 312 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
PALB2-202ENST00000561514 DBF4Q9UBU7 674 aaPredicted RBP10.96□□□□□ -0.65
PALB2-202ENST00000561514 ABT1Q9ULW3 272 aaKnown RBP10.96□□□□□ -0.65
PALB2-202ENST00000561514 ZNF609O15014 1411 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
PALB2-202ENST00000561514 MAP2K2P36507 400 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 ECE1P42892 770 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 LBX1P52954 281 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
PALB2-202ENST00000561514 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
PALB2-202ENST00000561514 TNIP1Q15025 636 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 SAPCD2Q86UD0 394 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 DPF2Q92785 391 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 HYPKQ9NX55 129 aa10.95□□□□□ -0.66
PALB2-202ENST00000561514 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
PALB2-202ENST00000561514 TRPM4Q8TD43 1214 aa10.94□□□□□ -0.66
PALB2-202ENST00000561514 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
PALB2-202ENST00000561514 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
PALB2-202ENST00000561514 LAMB2P55268 1798 aa10.94□□□□□ -0.66
PALB2-202ENST00000561514 COL4A1P02462 1669 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 RAD17O75943 681 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 CYP4F22Q6NT55 531 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 CELF1Q92879 486 aaKnown RBP10.93□□□□□ -0.66
PALB2-202ENST00000561514 GPR101Q96P66 508 aaPredicted RBP10.93□□□□□ -0.66
PALB2-202ENST00000561514 MBIPQ9NS73 344 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 PODXL2Q9NZ53 605 aa10.93□□□□□ -0.66
PALB2-202ENST00000561514 RTL9Q8NET4 1388 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 CA12O43570 354 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 CELF2O95319 508 aaKnown RBP10.92□□□□□ -0.66
PALB2-202ENST00000561514 RPS12P25398 132 aaKnown RBP10.92□□□□□ -0.66
PALB2-202ENST00000561514 WDR43Q15061 677 aaKnown RBP eCLIP10.92□□□□□ -0.66
PALB2-202ENST00000561514 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 CDC37L1Q7L3B6 337 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 FAM89AQ96GI7 184 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 GLIS2Q9BZE0 524 aaPredicted RBP10.92□□□□□ -0.66
PALB2-202ENST00000561514 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 POLLQ9UGP5 575 aa10.92□□□□□ -0.66
PALB2-202ENST00000561514 CNOT7Q9UIV1 285 aaKnown RBP10.92□□□□□ -0.66
PALB2-202ENST00000561514 DDX60Q8IY21 1712 aaKnown RBP10.92□□□□□ -0.66
PALB2-202ENST00000561514 SHTN1A0MZ66 631 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 PSMD14O00487 310 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 IRS4O14654 1257 aaPredicted RBP10.91□□□□□ -0.66
PALB2-202ENST00000561514 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
PALB2-202ENST00000561514 DDX10Q13206 875 aaKnown RBP10.91□□□□□ -0.66
PALB2-202ENST00000561514 WASHC4Q2M389 1173 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 ZBTB38Q8NAP3 1195 aaPredicted RBP10.91□□□□□ -0.66
PALB2-202ENST00000561514 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
PALB2-202ENST00000561514 PRKRIP1Q9H875 184 aaPredicted RBP10.91□□□□□ -0.66
PALB2-202ENST00000561514 H7C1D1 291 aa10.9□□□□□ -0.66
PALB2-202ENST00000561514 RPS8P62241 208 aaKnown RBP10.9□□□□□ -0.66
PALB2-202ENST00000561514 GPSM2P81274 684 aa10.9□□□□□ -0.66
PALB2-202ENST00000561514 CCDC191Q8NCU4 936 aa10.9□□□□□ -0.66
PALB2-202ENST00000561514 TBC1D16Q8TBP0 767 aa10.9□□□□□ -0.66
PALB2-202ENST00000561514 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
PALB2-202ENST00000561514 AOC2O75106 756 aa10.89□□□□□ -0.67
PALB2-202ENST00000561514 PCCAP05165 728 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms