RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 MTMR7Q9Y216 660 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
HERC1-215ENST00000561436 A6NHS1 94 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 RARAP10276 462 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 MPSTP25325 297 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 DGKGP49619 791 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 NUDT8Q8WV74 236 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 AVENQ9NQS1 362 aaPredicted RBP6.48□□□□□ -1.37
HERC1-215ENST00000561436 DNAJB12Q9NXW2 375 aaKnown RBP6.48□□□□□ -1.37
HERC1-215ENST00000561436 STIM2Q9P246 746 aa6.48□□□□□ -1.37
HERC1-215ENST00000561436 M0R082 166 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 EPB42P16452 691 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 COL8A1P27658 744 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 SERPINB4P48594 390 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 PLAURQ03405 335 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 ZNF417Q8TAU3 575 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
HERC1-215ENST00000561436 SCARF2Q96GP6 870 aaPredicted RBP6.47□□□□□ -1.37
HERC1-215ENST00000561436 ZNF587Q96SQ5 575 aaPredicted RBP6.47□□□□□ -1.37
HERC1-215ENST00000561436 SLC6A14Q9UN76 642 aa6.47□□□□□ -1.37
HERC1-215ENST00000561436 MYO15BQ96JP2 1530 aa6.46□□□□□ -1.37
HERC1-215ENST00000561436 ZBTB42B2RXF5 422 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 GDF11O95390 407 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 CPB1P15086 417 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 KCNMA1Q12791 1236 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 PODNQ7Z5L7 613 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 TNFRSF25Q93038 417 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 TRIM11Q96F44 468 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 NSUN5Q96P11 429 aaKnown RBP6.46□□□□□ -1.38
HERC1-215ENST00000561436 LRRC4BQ9NT99 713 aa6.46□□□□□ -1.38
HERC1-215ENST00000561436 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 UBAP1LF5GYI3 381 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 J3QW42 95 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 MMP20O60882 483 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 ALAS2P22557 587 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 DNM1Q05193 864 aaKnown RBP6.45□□□□□ -1.38
HERC1-215ENST00000561436 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 DHX32Q7L7V1 743 aaKnown RBP6.45□□□□□ -1.38
HERC1-215ENST00000561436 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
HERC1-215ENST00000561436 EDEM1Q92611 657 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
HERC1-215ENST00000561436 MKL2Q9ULH7 1088 aa6.45□□□□□ -1.38
HERC1-215ENST00000561436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.45□□□□□ -1.38
HERC1-215ENST00000561436 ARID4AP29374 1257 aaPredicted RBP6.44□□□□□ -1.38
HERC1-215ENST00000561436 EIF1AXP47813 144 aaKnown RBP6.44□□□□□ -1.38
HERC1-215ENST00000561436 PSAPL1Q6NUJ1 521 aa6.44□□□□□ -1.38
HERC1-215ENST00000561436 FAM35AQ86V20 835 aa6.44□□□□□ -1.38
HERC1-215ENST00000561436 TMEM151AQ8N4L1 468 aa6.44□□□□□ -1.38
HERC1-215ENST00000561436 NUDT16Q96DE0 195 aaKnown RBP6.44□□□□□ -1.38
HERC1-215ENST00000561436 IVNS1ABPQ9Y6Y0 642 aa6.44□□□□□ -1.38
HERC1-215ENST00000561436 PHF20L1A8MW92 1017 aa6.43□□□□□ -1.38
HERC1-215ENST00000561436 RNF225M0QZC1 329 aaPredicted RBP6.43□□□□□ -1.38
HERC1-215ENST00000561436 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
HERC1-215ENST00000561436 COL13A1Q5TAT6 717 aaPredicted RBP6.43□□□□□ -1.38
HERC1-215ENST00000561436 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
HERC1-215ENST00000561436 DCAF5Q96JK2 942 aa6.43□□□□□ -1.38
HERC1-215ENST00000561436 PLVAPQ9BX97 442 aa6.43□□□□□ -1.38
HERC1-215ENST00000561436 GGNBP2Q9H3C7 697 aa6.43□□□□□ -1.38
HERC1-215ENST00000561436 JPH1Q9HDC5 661 aaPredicted RBP6.43□□□□□ -1.38
HERC1-215ENST00000561436 ITGB2P05107 769 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 AAMPQ13685 434 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 COL9A3Q14050 684 aaPredicted RBP6.42□□□□□ -1.38
HERC1-215ENST00000561436 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 C20orf204Q6ZNR8 217 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 ABTB2Q8N961 1025 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 PIK3R5Q8WYR1 880 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 CCDC87Q9NVE4 849 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 TMEM63CQ9P1W3 806 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 POLIQ9UNA4 740 aa6.42□□□□□ -1.38
HERC1-215ENST00000561436 GNEQ9Y223 722 aaKnown RBP6.42□□□□□ -1.38
HERC1-215ENST00000561436 KRBA1A5PL33 1030 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 H3BRB1 525 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 GNB5O14775 395 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 EIF2AK2P19525 551 aaKnown RBP6.41□□□□□ -1.38
HERC1-215ENST00000561436 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 NOM1Q5C9Z4 860 aaKnown RBP6.41□□□□□ -1.38
HERC1-215ENST00000561436 GPAT2Q6NUI2 795 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 TUT1Q9H6E5 874 aaKnown RBP6.41□□□□□ -1.38
HERC1-215ENST00000561436 TLR7Q9NYK1 1049 aaKnown RBP6.41□□□□□ -1.38
HERC1-215ENST00000561436 KANSL3Q9P2N6 904 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
HERC1-215ENST00000561436 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
HERC1-215ENST00000561436 EGFRP00533 1210 aa6.4□□□□□ -1.38
HERC1-215ENST00000561436 PDGFAP04085 211 aa6.4□□□□□ -1.38
HERC1-215ENST00000561436 NLRP13Q86W25 1043 aa6.4□□□□□ -1.38
HERC1-215ENST00000561436 CNTN3Q9P232 1028 aa6.4□□□□□ -1.38
HERC1-215ENST00000561436 FZD6O60353 706 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 NID1P14543 1247 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 ACPPP15309 386 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 GPLD1P80108 840 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 PLA2G4EQ3MJ16 856 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 KANK3Q6NY19 840 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 TRPM4Q8TD43 1214 aa6.39□□□□□ -1.39
HERC1-215ENST00000561436 SMG9Q9H0W8 520 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms