RNA–Protein interactions for RNA: ENST00000561314.5

MARK3-226, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-226ENST00000561314 PDE8AO60658 829 aa13.72□□□□□ -0.21
MARK3-226ENST00000561314 BBOX1O75936 387 aa13.72□□□□□ -0.21
MARK3-226ENST00000561314 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
MARK3-226ENST00000561314 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
MARK3-226ENST00000561314 OLFM4Q6UX06 510 aa13.71□□□□□ -0.21
MARK3-226ENST00000561314 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
MARK3-226ENST00000561314 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
MARK3-226ENST00000561314 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
MARK3-226ENST00000561314 ABCC4O15439 1325 aa13.7□□□□□ -0.22
MARK3-226ENST00000561314 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
MARK3-226ENST00000561314 SLX4Q8IY92 1834 aa13.7□□□□□ -0.22
MARK3-226ENST00000561314 GRM8O00222 908 aa13.7□□□□□ -0.22
MARK3-226ENST00000561314 CSF1RP07333 972 aa13.7□□□□□ -0.22
MARK3-226ENST00000561314 DDX46Q7L014 1031 aaKnown RBP13.7□□□□□ -0.22
MARK3-226ENST00000561314 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
MARK3-226ENST00000561314 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
MARK3-226ENST00000561314 UTYO14607 1347 aa13.69□□□□□ -0.22
MARK3-226ENST00000561314 NFKBIEO00221 500 aa13.69□□□□□ -0.22
MARK3-226ENST00000561314 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
MARK3-226ENST00000561314 PRELPP51888 382 aa13.69□□□□□ -0.22
MARK3-226ENST00000561314 FOXO4P98177 505 aa13.69□□□□□ -0.22
MARK3-226ENST00000561314 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
MARK3-226ENST00000561314 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
MARK3-226ENST00000561314 TRIM27P14373 513 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
MARK3-226ENST00000561314 CTSWP56202 376 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
MARK3-226ENST00000561314 GRAPQ13588 217 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 CCDC152Q4G0S7 254 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 SLC51AQ86UW1 340 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
MARK3-226ENST00000561314 CELF1Q92879 486 aaKnown RBP13.68□□□□□ -0.22
MARK3-226ENST00000561314 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
MARK3-226ENST00000561314 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
MARK3-226ENST00000561314 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
MARK3-226ENST00000561314 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
MARK3-226ENST00000561314 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
MARK3-226ENST00000561314 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
MARK3-226ENST00000561314 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
MARK3-226ENST00000561314 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
MARK3-226ENST00000561314 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 PPEF1O14829 653 aaPredicted RBP13.66□□□□□ -0.22
MARK3-226ENST00000561314 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 CCDC93Q567U6 631 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 ZKSCAN2Q63HK3 967 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
MARK3-226ENST00000561314 GREM2Q9H772 168 aa13.66□□□□□ -0.22
MARK3-226ENST00000561314 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 DDX60Q8IY21 1712 aaKnown RBP13.65□□□□□ -0.22
MARK3-226ENST00000561314 YY1P25490 414 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 RASSF7Q02833 373 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 RTL9Q8NET4 1388 aa13.65□□□□□ -0.22
MARK3-226ENST00000561314 LMNB1P20700 586 aa13.64□□□□□ -0.23
MARK3-226ENST00000561314 FKBP4Q02790 459 aaKnown RBP eCLIP13.64□□□□□ -0.23
MARK3-226ENST00000561314 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
MARK3-226ENST00000561314 PSMD1Q99460 953 aa13.64□□□□□ -0.23
MARK3-226ENST00000561314 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
MARK3-226ENST00000561314 RABL6Q3YEC7 729 aaPredicted RBP13.63□□□□□ -0.23
MARK3-226ENST00000561314 CLUAP1Q96AJ1 413 aa13.63□□□□□ -0.23
MARK3-226ENST00000561314 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
MARK3-226ENST00000561314 LAMB2P55268 1798 aa13.63□□□□□ -0.23
MARK3-226ENST00000561314 TAF1P21675 1872 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 RLBP1P12271 317 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 ITGA6P23229 1130 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
MARK3-226ENST00000561314 BSDC1Q9NW68 430 aaPredicted RBP13.62□□□□□ -0.23
MARK3-226ENST00000561314 COL4A1P02462 1669 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 CHD4Q14839 1912 aa13.62□□□□□ -0.23
MARK3-226ENST00000561314 MPNDQ8N594 471 aa13.61□□□□□ -0.23
MARK3-226ENST00000561314 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
MARK3-226ENST00000561314 CDC5LQ99459 802 aaKnown RBP13.61□□□□□ -0.23
MARK3-226ENST00000561314 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
MARK3-226ENST00000561314 ZNF277Q9NRM2 450 aaPredicted RBP13.61□□□□□ -0.23
MARK3-226ENST00000561314 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
MARK3-226ENST00000561314 MINPP1Q9UNW1 487 aa13.61□□□□□ -0.23
MARK3-226ENST00000561314 GPSM2P81274 684 aa13.6□□□□□ -0.23
MARK3-226ENST00000561314 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
MARK3-226ENST00000561314 FER1L6Q2WGJ9 1857 aa13.6□□□□□ -0.23
MARK3-226ENST00000561314 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
MARK3-226ENST00000561314 MEIS3Q99687 375 aa13.6□□□□□ -0.23
MARK3-226ENST00000561314 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
MARK3-226ENST00000561314 NSFL1CQ9UNZ2 370 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms