RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
LRRC28-221ENST00000561276 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
LRRC28-221ENST00000561276 PDE8AO60658 829 aa12.94□□□□□ -0.34
LRRC28-221ENST00000561276 CHRNA5P30532 468 aa12.94□□□□□ -0.34
LRRC28-221ENST00000561276 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
LRRC28-221ENST00000561276 MEIS3Q99687 375 aa12.94□□□□□ -0.34
LRRC28-221ENST00000561276 GNAI3P08754 354 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 SRGNP10124 158 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 DPEP1P16444 411 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 KCNA3P22001 575 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 FOXO4P98177 505 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 MVPQ14764 893 aaKnown RBP12.93□□□□□ -0.34
LRRC28-221ENST00000561276 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 DLEC1Q9Y238 1755 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
LRRC28-221ENST00000561276 UBTFL1P0CB47 393 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-221ENST00000561276 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-221ENST00000561276 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
LRRC28-221ENST00000561276 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
LRRC28-221ENST00000561276 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
LRRC28-221ENST00000561276 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
LRRC28-221ENST00000561276 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
LRRC28-221ENST00000561276 PLA2G12BQ9BX93 195 aa12.92□□□□□ -0.34
LRRC28-221ENST00000561276 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
LRRC28-221ENST00000561276 CRY2Q49AN0 593 aa12.91□□□□□ -0.34
LRRC28-221ENST00000561276 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
LRRC28-221ENST00000561276 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
LRRC28-221ENST00000561276 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.34
LRRC28-221ENST00000561276 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
LRRC28-221ENST00000561276 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
LRRC28-221ENST00000561276 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
LRRC28-221ENST00000561276 CSF1RP07333 972 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 NPR1P16066 1061 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-221ENST00000561276 CTSWP56202 376 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
LRRC28-221ENST00000561276 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
LRRC28-221ENST00000561276 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
LRRC28-221ENST00000561276 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
LRRC28-221ENST00000561276 GNAI2P04899 355 aa12.89□□□□□ -0.35
LRRC28-221ENST00000561276 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
LRRC28-221ENST00000561276 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
LRRC28-221ENST00000561276 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
LRRC28-221ENST00000561276 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
LRRC28-221ENST00000561276 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
LRRC28-221ENST00000561276 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
LRRC28-221ENST00000561276 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 GREM2Q9H772 168 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
LRRC28-221ENST00000561276 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
LRRC28-221ENST00000561276 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
LRRC28-221ENST00000561276 BBOX1O75936 387 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 ITGA6P23229 1130 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 RPS8P62241 208 aaKnown RBP12.86□□□□□ -0.35
LRRC28-221ENST00000561276 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
LRRC28-221ENST00000561276 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
LRRC28-221ENST00000561276 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
LRRC28-221ENST00000561276 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 COL4A1P02462 1669 aa12.86□□□□□ -0.35
LRRC28-221ENST00000561276 ARFGEF1Q9Y6D6 1849 aa12.85□□□□□ -0.35
LRRC28-221ENST00000561276 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
LRRC28-221ENST00000561276 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
LRRC28-221ENST00000561276 GRAPQ13588 217 aa12.85□□□□□ -0.35
LRRC28-221ENST00000561276 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
LRRC28-221ENST00000561276 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
LRRC28-221ENST00000561276 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
LRRC28-221ENST00000561276 ATP8B2P98198 1209 aa12.84□□□□□ -0.35
LRRC28-221ENST00000561276 ANKRD18AQ8IVF6 992 aa12.84□□□□□ -0.35
LRRC28-221ENST00000561276 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
LRRC28-221ENST00000561276 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
LRRC28-221ENST00000561276 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-221ENST00000561276 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
LRRC28-221ENST00000561276 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
LRRC28-221ENST00000561276 C21orf2O43822 256 aa12.83□□□□□ -0.36
LRRC28-221ENST00000561276 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
LRRC28-221ENST00000561276 MTX1Q13505 466 aa12.83□□□□□ -0.36
LRRC28-221ENST00000561276 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
LRRC28-221ENST00000561276 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
LRRC28-221ENST00000561276 PNMA6EA0A0J9YXQ4 647 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
LRRC28-221ENST00000561276 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
LRRC28-221ENST00000561276 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
LRRC28-221ENST00000561276 GPR162Q16538 588 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 LDHAL6AQ6ZMR3 332 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms