RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 TCEANC2Q96MN5 208 aa20.77■□□□□ 0.92
MEIS3-211ENST00000561204 A0A087WZG4 1122 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
MEIS3-211ENST00000561204 LAMB4A4D0S4 1761 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 VPS37CA5D8V6 355 aaPredicted RBP20.76■□□□□ 0.91
MEIS3-211ENST00000561204 OFD1O75665 1012 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 TSGA10IPQ3SY00 556 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 NDUFB9Q9Y6M9 179 aa20.76■□□□□ 0.91
MEIS3-211ENST00000561204 ZNF500O60304 480 aaPredicted RBP20.75■□□□□ 0.91
MEIS3-211ENST00000561204 TOB2Q14106 344 aaPredicted RBP20.75■□□□□ 0.91
MEIS3-211ENST00000561204 USPL1Q5W0Q7 1092 aa20.75■□□□□ 0.91
MEIS3-211ENST00000561204 HMG20BQ9P0W2 317 aa20.75■□□□□ 0.91
MEIS3-211ENST00000561204 CCDC39Q9UFE4 941 aa20.75■□□□□ 0.91
MEIS3-211ENST00000561204 ZKSCAN5Q9Y2L8 839 aa20.75■□□□□ 0.91
MEIS3-211ENST00000561204 DBNDD2Q9BQY9 259 aa20.75■□□□□ 0.91
MEIS3-211ENST00000561204 LETM1O95202 739 aaPredicted RBP20.74■□□□□ 0.91
MEIS3-211ENST00000561204 ANKRD1Q15327 319 aa20.74■□□□□ 0.91
MEIS3-211ENST00000561204 LARP1BQ659C4 914 aaKnown RBP20.74■□□□□ 0.91
MEIS3-211ENST00000561204 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
MEIS3-211ENST00000561204 PARP4Q9UKK3 1724 aaKnown RBP20.74■□□□□ 0.91
MEIS3-211ENST00000561204 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
MEIS3-211ENST00000561204 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 CHGBP05060 677 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 CSPP1Q1MSJ5 1256 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 NBPF14Q5TI25 921 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
MEIS3-211ENST00000561204 NBPF15Q8N660 670 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 CPDO75976 1380 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 ZNF609O15014 1411 aa20.73■□□□□ 0.91
MEIS3-211ENST00000561204 LMBR1LQ6UX01 489 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 CDC37L1Q7L3B6 337 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 RFX7Q2KHR2 1363 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 FOXO4P98177 505 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 UVSSAQ2YD98 709 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
MEIS3-211ENST00000561204 HAUS7Q99871 368 aa20.72■□□□□ 0.91
MEIS3-211ENST00000561204 MCM5P33992 734 aa20.71■□□□□ 0.91
MEIS3-211ENST00000561204 CADPS2Q86UW7 1296 aa20.71■□□□□ 0.91
MEIS3-211ENST00000561204 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
MEIS3-211ENST00000561204 H7C1W4 665 aa20.7■□□□□ 0.91
MEIS3-211ENST00000561204 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.91
MEIS3-211ENST00000561204 PDIA4P13667 645 aaKnown RBP20.7■□□□□ 0.9
MEIS3-211ENST00000561204 HCLS1P14317 486 aaPredicted RBP20.7■□□□□ 0.9
MEIS3-211ENST00000561204 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.7■□□□□ 0.9
MEIS3-211ENST00000561204 FUCA2Q9BTY2 467 aa20.7■□□□□ 0.9
MEIS3-211ENST00000561204 PDCP20941 246 aa20.69■□□□□ 0.9
MEIS3-211ENST00000561204 FERMT3Q86UX7 667 aa20.69■□□□□ 0.9
MEIS3-211ENST00000561204 KRT32Q14532 448 aa20.69■□□□□ 0.9
MEIS3-211ENST00000561204 GIMAP6Q6P9H5 292 aa20.69■□□□□ 0.9
MEIS3-211ENST00000561204 TTLL7Q6ZT98 887 aa20.69■□□□□ 0.9
MEIS3-211ENST00000561204 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
MEIS3-211ENST00000561204 STK3Q13188 491 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 FAM173BQ6P4H8 233 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 ATG9AQ7Z3C6 839 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 MCMDC2Q4G0Z9 681 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 NEK1Q96PY6 1258 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 USP25Q9UHP3 1055 aa20.68■□□□□ 0.9
MEIS3-211ENST00000561204 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
MEIS3-211ENST00000561204 KRT85P78386 507 aa20.67■□□□□ 0.9
MEIS3-211ENST00000561204 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
MEIS3-211ENST00000561204 CHMP3Q9Y3E7 222 aa20.67■□□□□ 0.9
MEIS3-211ENST00000561204 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
MEIS3-211ENST00000561204 TJP1Q07157 1748 aa20.67■□□□□ 0.9
MEIS3-211ENST00000561204 CYP21A2P08686 494 aa20.66■□□□□ 0.9
MEIS3-211ENST00000561204 KBTBD3Q8NAB2 608 aa20.66■□□□□ 0.9
MEIS3-211ENST00000561204 TPM2P07951 284 aa20.66■□□□□ 0.9
MEIS3-211ENST00000561204 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
MEIS3-211ENST00000561204 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
MEIS3-211ENST00000561204 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
MEIS3-211ENST00000561204 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
MEIS3-211ENST00000561204 PTMAP06454 111 aaKnown RBP20.65■□□□□ 0.9
MEIS3-211ENST00000561204 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
MEIS3-211ENST00000561204 ELP1O95163 1332 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 KCPQ6ZWJ8 1503 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 A1BGP04217 495 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 GTF3C6Q969F1 213 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 WDR17Q8IZU2 1322 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
MEIS3-211ENST00000561204 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
MEIS3-211ENST00000561204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
MEIS3-211ENST00000561204 PALLDQ8WX93 1383 aa20.64■□□□□ 0.89
MEIS3-211ENST00000561204 JAK2O60674 1132 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 TIMM10P62072 90 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 SLFNL1Q499Z3 407 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 Q6ZUG5 572 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 ERVV-2B6SEH9 535 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 ADCY5O95622 1261 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 GPR108Q9NPR9 543 aa20.63■□□□□ 0.89
MEIS3-211ENST00000561204 GOLIM4O00461 696 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 PAPPAQ13219 1627 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 KDM4AO75164 1064 aa20.62■□□□□ 0.89
MEIS3-211ENST00000561204 IL15P40933 162 aaPredicted RBP20.62■□□□□ 0.89
MEIS3-211ENST00000561204 PRDM11Q9NQV5 511 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms