RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GLIS2Q9BZE0 524 aaPredicted RBP24.48■■□□□ 1.51
TPM1-226ENST00000560959 PNNQ9H307 717 aaKnown RBP24.48■■□□□ 1.51
TPM1-226ENST00000560959 HIRAP54198 1017 aaPredicted RBP24.46■■□□□ 1.51
TPM1-226ENST00000560959 PDIA6Q15084 440 aa24.46■■□□□ 1.51
TPM1-226ENST00000560959 MCOLN1Q9GZU1 580 aa24.46■■□□□ 1.51
TPM1-226ENST00000560959 TSKSQ9UJT2 592 aa24.46■■□□□ 1.51
TPM1-226ENST00000560959 NOGQ13253 232 aa24.45■■□□□ 1.5
TPM1-226ENST00000560959 HSP90AB3PQ58FF7 597 aa24.45■■□□□ 1.5
TPM1-226ENST00000560959 BCL2L13Q9BXK5 485 aa24.45■■□□□ 1.5
TPM1-226ENST00000560959 TMC4Q7Z404 712 aa24.44■■□□□ 1.5
TPM1-226ENST00000560959 BABAM1Q9NWV8 329 aa24.44■■□□□ 1.5
TPM1-226ENST00000560959 H7C1D1 291 aa24.43■■□□□ 1.5
TPM1-226ENST00000560959 THUMPD2Q9BTF0 503 aaKnown RBP24.43■■□□□ 1.5
TPM1-226ENST00000560959 CNOT7Q9UIV1 285 aaKnown RBP24.43■■□□□ 1.5
TPM1-226ENST00000560959 RAD17O75943 681 aa24.42■■□□□ 1.5
TPM1-226ENST00000560959 DDX46Q7L014 1031 aaKnown RBP24.42■■□□□ 1.5
TPM1-226ENST00000560959 DPF2Q92785 391 aa24.42■■□□□ 1.5
TPM1-226ENST00000560959 PCDH10Q9P2E7 1040 aa24.42■■□□□ 1.5
TPM1-226ENST00000560959 GRAPQ13588 217 aa24.41■■□□□ 1.5
TPM1-226ENST00000560959 NLRP10Q86W26 655 aa24.41■■□□□ 1.5
TPM1-226ENST00000560959 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
TPM1-226ENST00000560959 TSPYL4Q9UJ04 414 aa24.41■■□□□ 1.5
TPM1-226ENST00000560959 TRPM4Q8TD43 1214 aa24.4■■□□□ 1.5
TPM1-226ENST00000560959 ZNF408Q9H9D4 720 aa24.4■■□□□ 1.5
TPM1-226ENST00000560959 YDJCA8MPS7 323 aa24.39■■□□□ 1.49
TPM1-226ENST00000560959 EIF2S2P20042 333 aaKnown RBP24.39■■□□□ 1.49
TPM1-226ENST00000560959 TCIRG1Q13488 830 aa24.39■■□□□ 1.49
TPM1-226ENST00000560959 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
TPM1-226ENST00000560959 HCLS1P14317 486 aaPredicted RBP24.38■■□□□ 1.49
TPM1-226ENST00000560959 DGKZQ13574 1117 aa24.38■■□□□ 1.49
TPM1-226ENST00000560959 TRMT112Q9UI30 125 aaKnown RBP24.38■■□□□ 1.49
TPM1-226ENST00000560959 SH3TC1Q8TE82 1336 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 MAPK8IP3Q9UPT6 1336 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 HUNKP57058 714 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 PROSER3Q2NL68 480 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 COPS6Q7L5N1 327 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 USP48Q86UV5 1035 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 MICALL2Q8IY33 904 aa24.37■■□□□ 1.49
TPM1-226ENST00000560959 SAGE1Q9NXZ1 904 aa24.36■■□□□ 1.49
TPM1-226ENST00000560959 RPS12P25398 132 aaKnown RBP24.35■■□□□ 1.49
TPM1-226ENST00000560959 CCDC102AQ96A19 550 aa24.35■■□□□ 1.49
TPM1-226ENST00000560959 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 WASHC4Q2M389 1173 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 RGMBQ6NW40 437 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 XAGE3Q8WTP9 111 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 CFAP44Q96MT7 982 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 ZIC5Q96T25 663 aa24.34■■□□□ 1.49
TPM1-226ENST00000560959 ANXA1P04083 346 aa24.33■■□□□ 1.49
TPM1-226ENST00000560959 C2orf69Q8N8R5 385 aa24.33■■□□□ 1.49
TPM1-226ENST00000560959 CASP8AP2Q9UKL3 1982 aa24.33■■□□□ 1.48
TPM1-226ENST00000560959 SHTN1A0MZ66 631 aa24.32■■□□□ 1.48
TPM1-226ENST00000560959 FAM155AB1AL88 458 aaPredicted RBP24.32■■□□□ 1.48
TPM1-226ENST00000560959 PSMD14O00487 310 aa24.32■■□□□ 1.48
TPM1-226ENST00000560959 KRT26Q7Z3Y9 468 aa24.32■■□□□ 1.48
TPM1-226ENST00000560959 GBA2Q9HCG7 927 aaPredicted RBP24.32■■□□□ 1.48
TPM1-226ENST00000560959 ZBTB12Q9Y330 459 aaPredicted RBP24.32■■□□□ 1.48
TPM1-226ENST00000560959 RIPK4P57078 832 aa24.31■■□□□ 1.48
TPM1-226ENST00000560959 AIMP1Q12904 312 aaKnown RBP24.31■■□□□ 1.48
TPM1-226ENST00000560959 SF3B3Q15393 1217 aaKnown RBP24.31■■□□□ 1.48
TPM1-226ENST00000560959 SAMD7Q7Z3H4 446 aa24.31■■□□□ 1.48
TPM1-226ENST00000560959 LMOD3Q0VAK6 560 aa24.3■■□□□ 1.48
TPM1-226ENST00000560959 DCPSQ96C86 337 aaKnown RBP24.3■■□□□ 1.48
TPM1-226ENST00000560959 NSFL1CQ9UNZ2 370 aaKnown RBP24.3■■□□□ 1.48
TPM1-226ENST00000560959 DUOX1Q9NRD9 1551 aa24.29■■□□□ 1.48
TPM1-226ENST00000560959 EYA3Q99504 573 aa24.28■■□□□ 1.48
TPM1-226ENST00000560959 LAMB2P55268 1798 aa24.27■■□□□ 1.48
TPM1-226ENST00000560959 KIF23Q02241 960 aaPredicted RBP24.27■■□□□ 1.48
TPM1-226ENST00000560959 TBC1D10BQ4KMP7 808 aaPredicted RBP24.27■■□□□ 1.48
TPM1-226ENST00000560959 REM2Q8IYK8 340 aaPredicted RBP24.27■■□□□ 1.48
TPM1-226ENST00000560959 PLBD2Q8NHP8 589 aa24.27■■□□□ 1.48
TPM1-226ENST00000560959 DBNDD1Q9H9R9 158 aa24.27■■□□□ 1.48
TPM1-226ENST00000560959 POLLQ9UGP5 575 aa24.27■■□□□ 1.48
TPM1-226ENST00000560959 ZNF157P51786 506 aaPredicted RBP24.26■■□□□ 1.47
TPM1-226ENST00000560959 DLK2Q6UY11 383 aa24.26■■□□□ 1.47
TPM1-226ENST00000560959 CELF1Q92879 486 aaKnown RBP24.26■■□□□ 1.47
TPM1-226ENST00000560959 ISCA1Q9BUE6 129 aa24.26■■□□□ 1.47
TPM1-226ENST00000560959 RNF186Q9NXI6 227 aa24.26■■□□□ 1.47
TPM1-226ENST00000560959 LRRC37AA6NMS7 1700 aa24.25■■□□□ 1.47
TPM1-226ENST00000560959 C6orf229H3BNL8 230 aa24.25■■□□□ 1.47
TPM1-226ENST00000560959 EGFRP00533 1210 aa24.25■■□□□ 1.47
TPM1-226ENST00000560959 TMPOP42166 694 aaKnown RBP24.25■■□□□ 1.47
TPM1-226ENST00000560959 ANKRD13DQ6ZTN6 518 aa24.25■■□□□ 1.47
TPM1-226ENST00000560959 NECTIN2Q92692 538 aa24.25■■□□□ 1.47
TPM1-226ENST00000560959 TNRC18O15417 2968 aaPredicted RBP24.24■■□□□ 1.47
TPM1-226ENST00000560959 CHL1O00533 1208 aa24.24■■□□□ 1.47
TPM1-226ENST00000560959 ECE2O60344 883 aa24.24■■□□□ 1.47
TPM1-226ENST00000560959 VIL1P09327 827 aaKnown RBP24.24■■□□□ 1.47
TPM1-226ENST00000560959 RIMBP2O15034 1052 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 SLC10A3P09131 477 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 GPSM2P81274 684 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 TRIM28Q13263 835 aaKnown RBP24.23■■□□□ 1.47
TPM1-226ENST00000560959 SULF1Q8IWU6 871 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 FAM89AQ96GI7 184 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
TPM1-226ENST00000560959 ADM5C9JUS6 153 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 TRPA1O75762 1119 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 HOXB7P09629 217 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 RPS8P62241 208 aaKnown RBP24.22■■□□□ 1.47
TPM1-226ENST00000560959 KIF4BQ2VIQ3 1234 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 RBM26Q5T8P6 1007 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms