RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 JCADQ9P266 1359 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 FIBPO43427 364 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 FOXO4P98177 505 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
CRTC3-210ENST00000560927 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-210ENST00000560927 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
CRTC3-210ENST00000560927 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
CRTC3-210ENST00000560927 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 A1BGP04217 495 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 PSMA5P28066 241 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 CCDC129Q6ZRS4 1044 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.39
CRTC3-210ENST00000560927 TSPY26PQ9H489 355 aa17.46■□□□□ 0.39
CRTC3-210ENST00000560927 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
CRTC3-210ENST00000560927 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
CRTC3-210ENST00000560927 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
CRTC3-210ENST00000560927 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
CRTC3-210ENST00000560927 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
CRTC3-210ENST00000560927 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
CRTC3-210ENST00000560927 H7C1W4 665 aa17.45■□□□□ 0.38
CRTC3-210ENST00000560927 TOB2Q14106 344 aaPredicted RBP17.45■□□□□ 0.38
CRTC3-210ENST00000560927 NAP1L5Q96NT1 182 aaPredicted RBP17.45■□□□□ 0.38
CRTC3-210ENST00000560927 ZNF609O15014 1411 aa17.45■□□□□ 0.38
CRTC3-210ENST00000560927 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
CRTC3-210ENST00000560927 HAUS7Q99871 368 aa17.44■□□□□ 0.38
CRTC3-210ENST00000560927 ZBTB3Q9H5J0 574 aa17.44■□□□□ 0.38
CRTC3-210ENST00000560927 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
CRTC3-210ENST00000560927 UBE2HP62256 183 aa17.43■□□□□ 0.38
CRTC3-210ENST00000560927 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
CRTC3-210ENST00000560927 ATG9AQ7Z3C6 839 aa17.43■□□□□ 0.38
CRTC3-210ENST00000560927 TSGA10IPQ3SY00 556 aa17.43■□□□□ 0.38
CRTC3-210ENST00000560927 CWC25Q9NXE8 425 aaPredicted RBP17.43■□□□□ 0.38
CRTC3-210ENST00000560927 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
CRTC3-210ENST00000560927 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
CRTC3-210ENST00000560927 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 PHF14O94880 888 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 CCDC183Q5T5S1 534 aa17.42■□□□□ 0.38
CRTC3-210ENST00000560927 TIMM10P62072 90 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 STK3Q13188 491 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
CRTC3-210ENST00000560927 CDC37L1Q7L3B6 337 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.41■□□□□ 0.38
CRTC3-210ENST00000560927 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 ZNF594Q96JF6 807 aaPredicted RBP17.41■□□□□ 0.38
CRTC3-210ENST00000560927 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 UBR2Q8IWV8 1755 aa17.41■□□□□ 0.38
CRTC3-210ENST00000560927 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 HS1BP3Q53T59 392 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
CRTC3-210ENST00000560927 NUP188Q5SRE5 1749 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 TJP1Q07157 1748 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 IL2RBP14784 551 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
CRTC3-210ENST00000560927 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
CRTC3-210ENST00000560927 MCMDC2Q4G0Z9 681 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 FAM173BQ6P4H8 233 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
CRTC3-210ENST00000560927 RFX7Q2KHR2 1363 aa17.39■□□□□ 0.37
CRTC3-210ENST00000560927 CYP21A2P08686 494 aa17.39■□□□□ 0.37
CRTC3-210ENST00000560927 KBTBD3Q8NAB2 608 aa17.39■□□□□ 0.37
CRTC3-210ENST00000560927 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
CRTC3-210ENST00000560927 GOLIM4O00461 696 aa17.39■□□□□ 0.37
CRTC3-210ENST00000560927 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
CRTC3-210ENST00000560927 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
CRTC3-210ENST00000560927 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
CRTC3-210ENST00000560927 PUS3Q9BZE2 481 aaKnown RBP17.38■□□□□ 0.37
CRTC3-210ENST00000560927 KRT32Q14532 448 aa17.37■□□□□ 0.37
CRTC3-210ENST00000560927 CARD10Q9BWT7 1032 aa17.37■□□□□ 0.37
CRTC3-210ENST00000560927 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
CRTC3-210ENST00000560927 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
CRTC3-210ENST00000560927 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
CRTC3-210ENST00000560927 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
CRTC3-210ENST00000560927 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
CRTC3-210ENST00000560927 JAK2O60674 1132 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 Q6ZUG5 572 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
CRTC3-210ENST00000560927 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 EYA2O00167 538 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
CRTC3-210ENST00000560927 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 SHANK3Q9BYB0 1731 aa17.36■□□□□ 0.37
CRTC3-210ENST00000560927 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
CRTC3-210ENST00000560927 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
CRTC3-210ENST00000560927 PDCP20941 246 aa17.35■□□□□ 0.37
CRTC3-210ENST00000560927 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
CRTC3-210ENST00000560927 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
CRTC3-210ENST00000560927 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms