RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KCNQ3O43525 872 aa12.84□□□□□ -0.35
HERC1-210ENST00000560897 FKTNO75072 461 aa12.84□□□□□ -0.35
HERC1-210ENST00000560897 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
HERC1-210ENST00000560897 MKI67P46013 3256 aaKnown RBP12.84□□□□□ -0.35
HERC1-210ENST00000560897 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
HERC1-210ENST00000560897 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
HERC1-210ENST00000560897 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
HERC1-210ENST00000560897 FKBP1BP68106 108 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
HERC1-210ENST00000560897 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
HERC1-210ENST00000560897 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 GPTP24298 496 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 RPS12P25398 132 aaKnown RBP12.82□□□□□ -0.36
HERC1-210ENST00000560897 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 KNSTRNQ9Y448 316 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 NUP98P52948 1817 aa12.82□□□□□ -0.36
HERC1-210ENST00000560897 PAPPA2Q9BXP8 1791 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 PSMD14O00487 310 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 SREBF2Q12772 1141 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
HERC1-210ENST00000560897 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 ABCC4O15439 1325 aa12.81□□□□□ -0.36
HERC1-210ENST00000560897 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
HERC1-210ENST00000560897 YDJCA8MPS7 323 aa12.8□□□□□ -0.36
HERC1-210ENST00000560897 BBOX1O75936 387 aa12.8□□□□□ -0.36
HERC1-210ENST00000560897 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
HERC1-210ENST00000560897 SP8Q8IXZ3 490 aa12.8□□□□□ -0.36
HERC1-210ENST00000560897 CEMIPQ8WUJ3 1361 aa12.8□□□□□ -0.36
HERC1-210ENST00000560897 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
HERC1-210ENST00000560897 SUSD4Q5VX71 490 aa12.79□□□□□ -0.36
HERC1-210ENST00000560897 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
HERC1-210ENST00000560897 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
HERC1-210ENST00000560897 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
HERC1-210ENST00000560897 EGFRP00533 1210 aa12.78□□□□□ -0.36
HERC1-210ENST00000560897 KCNA4P22459 653 aa12.78□□□□□ -0.36
HERC1-210ENST00000560897 TM4SF4P48230 202 aa12.78□□□□□ -0.36
HERC1-210ENST00000560897 DBNDD1Q9H9R9 158 aa12.78□□□□□ -0.36
HERC1-210ENST00000560897 CEP290O15078 2479 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 NTSR2O95665 410 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 EN2P19622 333 aaPredicted RBP12.77□□□□□ -0.37
HERC1-210ENST00000560897 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
HERC1-210ENST00000560897 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
HERC1-210ENST00000560897 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.37
HERC1-210ENST00000560897 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 SZT2Q5T011 3432 aa12.77□□□□□ -0.37
HERC1-210ENST00000560897 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
HERC1-210ENST00000560897 CFHR5Q9BXR6 569 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
HERC1-210ENST00000560897 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
HERC1-210ENST00000560897 NF2P35240 595 aa12.75□□□□□ -0.37
HERC1-210ENST00000560897 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
HERC1-210ENST00000560897 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
HERC1-210ENST00000560897 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
HERC1-210ENST00000560897 UTP14AQ9BVJ6 771 aaKnown RBP12.75□□□□□ -0.37
HERC1-210ENST00000560897 G3V3G9 751 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 H0YGN5 161 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 UBE2Q2LH0YL09 131 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 ECE2O60344 883 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 GRAPQ13588 217 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
HERC1-210ENST00000560897 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 GRAPLQ8TC17 118 aaPredicted RBP12.74□□□□□ -0.37
HERC1-210ENST00000560897 ERO1AQ96HE7 468 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 EYA3Q99504 573 aa12.74□□□□□ -0.37
HERC1-210ENST00000560897 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
HERC1-210ENST00000560897 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
HERC1-210ENST00000560897 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 SCARF1Q14162 830 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 ARMC5Q96C12 935 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 PTPN22Q9Y2R2 807 aa12.73□□□□□ -0.37
HERC1-210ENST00000560897 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 MYL6BP14649 208 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
HERC1-210ENST00000560897 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
HERC1-210ENST00000560897 CENPFP49454 3210 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
HERC1-210ENST00000560897 BRCA2P51587 3418 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms