RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 NFIXQ14938 502 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 BEND3Q5T5X7 828 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 C20orf194Q5TEA3 1177 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 MSL1Q68DK7 614 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZNF34Q8IZ26 560 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 ARXQ96QS3 562 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 BMP2KQ9NSY1 1161 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 RIC1Q4ADV7 1423 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 C10orf71Q711Q0 1435 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 NEURL1BA8MQ27 555 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 IPO8O15397 1037 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 NTSR2O95665 410 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 GPTP24298 496 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 TM4SF1P30408 202 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 CWF19L2Q2TBE0 894 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 INTS3Q68E01 1043 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 NLRP10Q86W26 655 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 TMEM57Q8N5G2 664 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 LINS1Q8NG48 757 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 MTFR1LQ9H019 292 aa8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 TSPYL2Q9H2G4 693 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 SUPT16HQ9Y5B9 1047 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-210ENST00000560834 BRCA1P38398 1863 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 COL4A1P02462 1669 aa8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZBTB7AO95365 584 aa8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 DZIP1LQ8IYY4 767 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 PANK1Q8TE04 598 aa8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 A0A1B0GUL6 1792 aa8.91□□□□□ -0.98
CTDSPL2-210ENST00000560834 CACNA1SQ13698 1873 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 UTYO14607 1347 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 SPEF2Q9C093 1822 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 ALDH1L1O75891 902 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 MMP10P09238 476 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 CCT4P50991 539 aaKnown RBP8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 CASP7P55210 303 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 NEXNQ0ZGT2 675 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 GCKRQ14397 625 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 PDE3AQ14432 1141 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 PARP10Q53GL7 1025 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 SUSD4Q5VX71 490 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 BICDL1Q6ZP65 573 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 FTSJ3Q8IY81 847 aaKnown RBP8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 NLGN1Q8N2Q7 840 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 CCDC191Q8NCU4 936 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 SRCIN1Q9C0H9 1055 aa8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 CWC25Q9NXE8 425 aaPredicted RBP8.9□□□□□ -0.98
CTDSPL2-210ENST00000560834 LRRC37AA6NMS7 1700 aa8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 PTGER2P43116 358 aa8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 MVPQ14764 893 aaKnown RBP8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 PRR5LQ6MZQ0 368 aa8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 SETDB2Q96T68 719 aa8.89□□□□□ -0.99
CTDSPL2-210ENST00000560834 CDHR2Q9BYE9 1310 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 FAM177BA6PVY3 158 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 GRM8O00222 908 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 SERPINB2P05120 415 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 PCCAP05165 728 aaPredicted RBP8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 MS4A1P11836 297 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 NUTM1Q86Y26 1132 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 ITPRIPQ8IWB1 547 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 SYNE4Q8N205 404 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 ZBTB38Q8NAP3 1195 aaPredicted RBP8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 MEIS3Q99687 375 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 COG6Q9Y2V7 657 aa8.88□□□□□ -0.99
CTDSPL2-210ENST00000560834 SH3TC1Q8TE82 1336 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 H7C1W4 665 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 ERFEQ4G0M1 354 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 UBE3BQ7Z3V4 1068 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 PPP1R42Q7Z4L9 355 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 CNBD1Q8NA66 436 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 FAM89AQ96GI7 184 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 CRBNQ96SW2 442 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 UTP14AQ9BVJ6 771 aaKnown RBP8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 NYXQ9GZU5 481 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 USP44Q9H0E7 712 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 TRMT112Q9UI30 125 aaKnown RBP8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 PARP3Q9Y6F1 533 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 TAF1P21675 1872 aa8.87□□□□□ -0.99
CTDSPL2-210ENST00000560834 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 TIE1P35590 1138 aa8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 CCDC24Q8N4L8 307 aa8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
CTDSPL2-210ENST00000560834 KAZALD1Q96I82 304 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms