RNA–Protein interactions for RNA: ENST00000560816.5

ETFA-217, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-217ENST00000560816 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
ETFA-217ENST00000560816 NUP98P52948 1817 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 PNMA6EA0A0J9YXQ4 647 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 ZBTB7AO95365 584 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 CSF1RP07333 972 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 POLA2Q14181 598 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 CCDC24Q8N4L8 307 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 SSH3Q8TE77 659 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
ETFA-217ENST00000560816 SF3B3Q15393 1217 aaKnown RBP9.51□□□□□ -0.89
ETFA-217ENST00000560816 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
ETFA-217ENST00000560816 CCDC152Q4G0S7 254 aa9.51□□□□□ -0.89
ETFA-217ENST00000560816 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
ETFA-217ENST00000560816 TTLL11Q8NHH1 800 aa9.51□□□□□ -0.89
ETFA-217ENST00000560816 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
ETFA-217ENST00000560816 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
ETFA-217ENST00000560816 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
ETFA-217ENST00000560816 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
ETFA-217ENST00000560816 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 CASZ1Q86V15 1759 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 SOCS7O14512 581 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 IGHDP01880 384 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 POLD1P28340 1107 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 CENPQQ7L2Z9 268 aaPredicted RBP9.5□□□□□ -0.89
ETFA-217ENST00000560816 POTEDQ86YR6 584 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 GREM2Q9H772 168 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
ETFA-217ENST00000560816 ANKRD18BA2A2Z9 1011 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 ITGA6P23229 1130 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
ETFA-217ENST00000560816 IFIT5Q13325 482 aaKnown RBP9.49□□□□□ -0.89
ETFA-217ENST00000560816 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 DCTPP1Q9H773 170 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
ETFA-217ENST00000560816 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 KLRG2A4D1S0 409 aaPredicted RBP9.48□□□□□ -0.89
ETFA-217ENST00000560816 SURF6O75683 361 aaKnown RBP9.48□□□□□ -0.89
ETFA-217ENST00000560816 PDE6BP35913 854 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 PTPN12Q05209 780 aaKnown RBP9.48□□□□□ -0.89
ETFA-217ENST00000560816 CRY2Q49AN0 593 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 TAF7LQ5H9L4 462 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 SMC5Q8IY18 1101 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 KLHDC4Q8TBB5 520 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 RNF39Q9H2S5 420 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 PA2G4Q9UQ80 394 aaKnown RBP9.48□□□□□ -0.89
ETFA-217ENST00000560816 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
ETFA-217ENST00000560816 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
ETFA-217ENST00000560816 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
ETFA-217ENST00000560816 HSP90AB4PQ58FF6 505 aa9.47□□□□□ -0.89
ETFA-217ENST00000560816 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
ETFA-217ENST00000560816 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
ETFA-217ENST00000560816 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
ETFA-217ENST00000560816 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
ETFA-217ENST00000560816 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
ETFA-217ENST00000560816 SIL1Q9H173 461 aa9.47□□□□□ -0.89
ETFA-217ENST00000560816 EXOC6BQ9Y2D4 811 aa9.47□□□□□ -0.89
ETFA-217ENST00000560816 LAMB2P55268 1798 aa9.47□□□□□ -0.89
ETFA-217ENST00000560816 TNRC6CQ9HCJ0 1690 aaKnown RBP9.46□□□□□ -0.89
ETFA-217ENST00000560816 DDX60Q8IY21 1712 aaKnown RBP9.46□□□□□ -0.89
ETFA-217ENST00000560816 EYA2O00167 538 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 CIAO1O76071 339 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 HOXA10P31260 410 aaPredicted RBP9.46□□□□□ -0.9
ETFA-217ENST00000560816 IGHMBP2P38935 993 aaKnown RBP9.46□□□□□ -0.9
ETFA-217ENST00000560816 PTGER2P43116 358 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 G3BP1Q13283 466 aaKnown RBP eCLIP9.46□□□□□ -0.92e-12■■□□□ 12.8
ETFA-217ENST00000560816 ERC1Q8IUD2 1116 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
ETFA-217ENST00000560816 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 PDZRN3Q9UPQ7 1066 aa9.46□□□□□ -0.9
ETFA-217ENST00000560816 H0YIN7 160 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 APBB1O00213 710 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 SRGNP10124 158 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 NPR1P16066 1061 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 IL15P40933 162 aaPredicted RBP9.45□□□□□ -0.9
ETFA-217ENST00000560816 GRAPQ13588 217 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 ATG9AQ7Z3C6 839 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
ETFA-217ENST00000560816 CELF1Q92879 486 aaKnown RBP9.45□□□□□ -0.9
ETFA-217ENST00000560816 CRAMP1Q96RY5 1269 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 MPHOSPH8Q99549 860 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 PUS3Q9BZE2 481 aaKnown RBP9.45□□□□□ -0.9
ETFA-217ENST00000560816 LRRCC1Q9C099 1032 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
ETFA-217ENST00000560816 LRP5O75197 1615 aa9.45□□□□□ -0.9
ETFA-217ENST00000560816 RPS8P62241 208 aaKnown RBP9.44□□□□□ -0.9
ETFA-217ENST00000560816 NUCB1Q02818 461 aa9.44□□□□□ -0.9
ETFA-217ENST00000560816 LRRC24Q50LG9 513 aa9.44□□□□□ -0.9
ETFA-217ENST00000560816 ANKRD45Q5TZF3 282 aa9.44□□□□□ -0.9
ETFA-217ENST00000560816 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
ETFA-217ENST00000560816 RHPN1Q8TCX5 695 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms