RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 CLEC4GQ6UXB4 293 aa11.56□□□□□ -0.56
TRPM1-212ENST00000560801 TMEM57Q8N5G2 664 aa11.56□□□□□ -0.56
TRPM1-212ENST00000560801 BOLA2Q9H3K6 86 aa11.56□□□□□ -0.56
TRPM1-212ENST00000560801 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 RAB11FIP3O75154 756 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
TRPM1-212ENST00000560801 CTNNA3Q9UI47 895 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 MED14O60244 1454 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 CYP7A1P22680 504 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
TRPM1-212ENST00000560801 XBP1P17861 261 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 CHRNA5P30532 468 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 TMEM132AQ24JP5 1023 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 KIAA0825Q8IV33 1275 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 NBR1Q14596 966 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 TTLL5Q6EMB2 1281 aa11.54□□□□□ -0.56
TRPM1-212ENST00000560801 SMCR8Q8TEV9 937 aaPredicted RBP11.54□□□□□ -0.56
TRPM1-212ENST00000560801 MPHOSPH6Q99547 160 aaKnown RBP11.54□□□□□ -0.56
TRPM1-212ENST00000560801 MAP4K4O95819 1239 aaPredicted RBP11.53□□□□□ -0.56
TRPM1-212ENST00000560801 IBSPP21815 317 aaPredicted RBP11.53□□□□□ -0.56
TRPM1-212ENST00000560801 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 CCDC184Q52MB2 194 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 USP48Q86UV5 1035 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 EXOC6Q8TAG9 804 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 USP19O94966 1318 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 IQGAP1P46940 1657 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 H3BQV1 296 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 SAFBQ15424 915 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRPM1-212ENST00000560801 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 HEG1Q9ULI3 1381 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 PLSCR1O15162 318 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 ARMC9Q7Z3E5 817 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 NUP133Q8WUM0 1156 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 IVNS1ABPQ9Y6Y0 642 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
TRPM1-212ENST00000560801 CHL1O00533 1208 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 RANBP6O60518 1105 aaKnown RBP11.52□□□□□ -0.56
TRPM1-212ENST00000560801 PLS1Q14651 629 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.56
TRPM1-212ENST00000560801 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 BRMS1Q9HCU9 246 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 DCAF15Q66K64 600 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.56
TRPM1-212ENST00000560801 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.56
TRPM1-212ENST00000560801 CROCC2H7BZ55 1655 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-212ENST00000560801 TAF5LO75529 589 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 NFIXQ14938 502 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.57
TRPM1-212ENST00000560801 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.57
TRPM1-212ENST00000560801 TTF2Q9UNY4 1162 aaKnown RBP11.52□□□□□ -0.57
TRPM1-212ENST00000560801 COL15A1P39059 1388 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 E9PCH4 1651 aa11.52□□□□□ -0.57
TRPM1-212ENST00000560801 GOLIM4O00461 696 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 ST18O60284 1047 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 INTS3Q68E01 1043 aaKnown RBP11.51□□□□□ -0.57
TRPM1-212ENST00000560801 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-212ENST00000560801 CPDO75976 1380 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
TRPM1-212ENST00000560801 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
TRPM1-212ENST00000560801 PDE4BQ07343 736 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 SUPT20HL1Q3ZLR7 823 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 MFSD14BQ5SR56 506 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 C3P01024 1663 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 DPEP1P16444 411 aa11.51□□□□□ -0.57
TRPM1-212ENST00000560801 MCTP1Q6DN14 999 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 ZBTB38Q8NAP3 1195 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-212ENST00000560801 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-212ENST00000560801 XDHP47989 1333 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 CCDC69A6NI79 296 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 PUM3Q15397 648 aaKnown RBP11.5□□□□□ -0.57
TRPM1-212ENST00000560801 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-212ENST00000560801 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 NRXN1Q9ULB1 1477 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 ZNF76P36508 570 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 CTSWP56202 376 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 TEX11Q8IYF3 940 aa11.5□□□□□ -0.57
TRPM1-212ENST00000560801 KDM4AO75164 1064 aa11.49□□□□□ -0.57
TRPM1-212ENST00000560801 PPP4R3BQ5MIZ7 849 aa11.49□□□□□ -0.57
TRPM1-212ENST00000560801 SLKQ9H2G2 1235 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-212ENST00000560801 PSMA5P28066 241 aa11.49□□□□□ -0.57
TRPM1-212ENST00000560801 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
TRPM1-212ENST00000560801 C9orf131Q5VYM1 1079 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms