RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 C8orf58Q8NAV2 365 aa21.21■□□□□ 0.99
SNX22-204ENST00000560607 KLRG2A4D1S0 409 aaPredicted RBP21.2■□□□□ 0.98
SNX22-204ENST00000560607 DLL1O00548 723 aa21.2■□□□□ 0.98
SNX22-204ENST00000560607 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
SNX22-204ENST00000560607 CAMTA2O94983 1202 aa21.19■□□□□ 0.98
SNX22-204ENST00000560607 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
SNX22-204ENST00000560607 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
SNX22-204ENST00000560607 PKN2Q16513 984 aaKnown RBP21.19■□□□□ 0.98
SNX22-204ENST00000560607 LARGE2Q8N3Y3 721 aa21.19■□□□□ 0.98
SNX22-204ENST00000560607 GPRC5DQ9NZD1 345 aa21.19■□□□□ 0.98
SNX22-204ENST00000560607 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
SNX22-204ENST00000560607 TSPYL6Q8N831 410 aa21.18■□□□□ 0.98
SNX22-204ENST00000560607 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
SNX22-204ENST00000560607 FAM155AB1AL88 458 aaPredicted RBP21.17■□□□□ 0.98
SNX22-204ENST00000560607 CDC37L1Q7L3B6 337 aa21.17■□□□□ 0.98
SNX22-204ENST00000560607 PGAP2Q9UHJ9 254 aa21.17■□□□□ 0.98
SNX22-204ENST00000560607 COL4A5P29400 1685 aa21.17■□□□□ 0.98
SNX22-204ENST00000560607 CENPBP07199 599 aaPredicted RBP21.16■□□□□ 0.98
SNX22-204ENST00000560607 HOXB7P09629 217 aa21.16■□□□□ 0.98
SNX22-204ENST00000560607 CT47B1P0C2W7 299 aaPredicted RBP21.16■□□□□ 0.98
SNX22-204ENST00000560607 RGMBQ6NW40 437 aa21.16■□□□□ 0.98
SNX22-204ENST00000560607 CCDC102AQ96A19 550 aa21.16■□□□□ 0.98
SNX22-204ENST00000560607 PRAMEF22A3QJZ6 481 aa21.15■□□□□ 0.98
SNX22-204ENST00000560607 EIF2S2P20042 333 aaKnown RBP21.15■□□□□ 0.98
SNX22-204ENST00000560607 CC2D2BQ6DHV5 1058 aa21.15■□□□□ 0.98
SNX22-204ENST00000560607 ZC3H15Q8WU90 426 aaKnown RBP21.15■□□□□ 0.98
SNX22-204ENST00000560607 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
SNX22-204ENST00000560607 HDGFL1Q5TGJ6 251 aa21.14■□□□□ 0.97
SNX22-204ENST00000560607 TPTE2Q6XPS3 522 aa21.14■□□□□ 0.97
SNX22-204ENST00000560607 NIM1KQ8IY84 436 aa21.14■□□□□ 0.97
SNX22-204ENST00000560607 NECTIN2Q92692 538 aa21.14■□□□□ 0.97
SNX22-204ENST00000560607 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
SNX22-204ENST00000560607 VAMP4O75379 141 aa21.13■□□□□ 0.97
SNX22-204ENST00000560607 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
SNX22-204ENST00000560607 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
SNX22-204ENST00000560607 HDAC9Q9UKV0 1011 aa21.12■□□□□ 0.97
SNX22-204ENST00000560607 USP16Q9Y5T5 823 aa21.12■□□□□ 0.97
SNX22-204ENST00000560607 ZNF157P51786 506 aaPredicted RBP21.11■□□□□ 0.97
SNX22-204ENST00000560607 CCDC30Q5VVM6 783 aa21.11■□□□□ 0.97
SNX22-204ENST00000560607 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
SNX22-204ENST00000560607 TCERG1O14776 1098 aaKnown RBP21.1■□□□□ 0.97
SNX22-204ENST00000560607 A1BGP04217 495 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 GRIPAP1Q4V328 841 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 CLEC4GQ6UXB4 293 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 USP48Q86UV5 1035 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 ZNF428Q96B54 188 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 CSRNP1Q96S65 589 aa21.1■□□□□ 0.97
SNX22-204ENST00000560607 GMPSP49915 693 aaPredicted RBP21.09■□□□□ 0.97
SNX22-204ENST00000560607 HIRAP54198 1017 aaPredicted RBP21.09■□□□□ 0.97
SNX22-204ENST00000560607 C2orf69Q8N8R5 385 aa21.09■□□□□ 0.97
SNX22-204ENST00000560607 ZNF652Q9Y2D9 606 aa21.09■□□□□ 0.97
SNX22-204ENST00000560607 GBA2Q9HCG7 927 aaPredicted RBP21.08■□□□□ 0.97
SNX22-204ENST00000560607 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
SNX22-204ENST00000560607 FAM177BA6PVY3 158 aa21.07■□□□□ 0.96
SNX22-204ENST00000560607 ALDH1L2Q3SY69 923 aa21.07■□□□□ 0.96
SNX22-204ENST00000560607 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
SNX22-204ENST00000560607 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
SNX22-204ENST00000560607 AKAP11Q9UKA4 1901 aa21.07■□□□□ 0.96
SNX22-204ENST00000560607 PPIP5K2O43314 1243 aa21.06■□□□□ 0.96
SNX22-204ENST00000560607 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
SNX22-204ENST00000560607 RARSP54136 660 aaKnown RBP21.06■□□□□ 0.96
SNX22-204ENST00000560607 CXCL9Q07325 125 aa21.06■□□□□ 0.96
SNX22-204ENST00000560607 DLK2Q6UY11 383 aa21.06■□□□□ 0.96
SNX22-204ENST00000560607 BCL2L13Q9BXK5 485 aa21.06■□□□□ 0.96
SNX22-204ENST00000560607 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
SNX22-204ENST00000560607 ERBB4Q15303 1308 aa21.05■□□□□ 0.96
SNX22-204ENST00000560607 MKI67P46013 3256 aaKnown RBP21.05■□□□□ 0.96
SNX22-204ENST00000560607 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
SNX22-204ENST00000560607 FBXO46Q6PJ61 603 aaPredicted RBP21.05■□□□□ 0.96
SNX22-204ENST00000560607 REM2Q8IYK8 340 aaPredicted RBP21.05■□□□□ 0.96
SNX22-204ENST00000560607 SLC17A8Q8NDX2 589 aa21.05■□□□□ 0.96
SNX22-204ENST00000560607 TRPM4Q8TD43 1214 aa21.05■□□□□ 0.96
SNX22-204ENST00000560607 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
SNX22-204ENST00000560607 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX22-204ENST00000560607 MYL6BP14649 208 aa21.04■□□□□ 0.96
SNX22-204ENST00000560607 ZNF296Q8WUU4 475 aaPredicted RBP21.04■□□□□ 0.96
SNX22-204ENST00000560607 ZNRF3Q9ULT6 936 aa21.04■□□□□ 0.96
SNX22-204ENST00000560607 NUP98P52948 1817 aa21.04■□□□□ 0.96
SNX22-204ENST00000560607 CDHR2Q9BYE9 1310 aa21.04■□□□□ 0.96
SNX22-204ENST00000560607 ANXA1P04083 346 aa21.03■□□□□ 0.96
SNX22-204ENST00000560607 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
SNX22-204ENST00000560607 SLC10A3P09131 477 aa21.03■□□□□ 0.96
SNX22-204ENST00000560607 AOC3Q16853 763 aa21.03■□□□□ 0.96
SNX22-204ENST00000560607 CRY2Q49AN0 593 aa21.02■□□□□ 0.96
SNX22-204ENST00000560607 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
SNX22-204ENST00000560607 BCAR3O75815 825 aa21.01■□□□□ 0.95
SNX22-204ENST00000560607 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
SNX22-204ENST00000560607 MRPL50Q8N5N7 158 aaKnown RBP21.01■□□□□ 0.95
SNX22-204ENST00000560607 RPGRQ92834 1020 aaKnown RBP21.01■□□□□ 0.95
SNX22-204ENST00000560607 VPS33BQ9H267 617 aa21.01■□□□□ 0.95
SNX22-204ENST00000560607 COLQQ9Y215 455 aaPredicted RBP21.01■□□□□ 0.95
SNX22-204ENST00000560607 ANKRD36CQ5JPF3 1778 aa21■□□□□ 0.95
SNX22-204ENST00000560607 NBPF26B4DH59 902 aa21■□□□□ 0.95
SNX22-204ENST00000560607 H7C1D1 291 aa21■□□□□ 0.95
SNX22-204ENST00000560607 PDIA6Q15084 440 aa21■□□□□ 0.95
SNX22-204ENST00000560607 NBPF10Q6P3W6 841 aaKnown RBP21■□□□□ 0.95
SNX22-204ENST00000560607 KRT26Q7Z3Y9 468 aa21■□□□□ 0.95
SNX22-204ENST00000560607 CNOT7Q9UIV1 285 aaKnown RBP21■□□□□ 0.95
SNX22-204ENST00000560607 KIF16BQ96L93 1317 aa21■□□□□ 0.95
SNX22-204ENST00000560607 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms