RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
TMOD3-207ENST00000560549 ALBP02768 609 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 C16orf46Q6P387 395 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 TREML1Q86YW5 311 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 MICALL1Q8N3F8 863 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 COL26A1Q96A83 441 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 CC2D2AQ9P2K1 1620 aa7.16□□□□□ -1.26
TMOD3-207ENST00000560549 NFKB1P19838 968 aa7.15□□□□□ -1.27
TMOD3-207ENST00000560549 ARSDP51689 593 aa7.15□□□□□ -1.27
TMOD3-207ENST00000560549 CD163Q86VB7 1156 aa7.15□□□□□ -1.27
TMOD3-207ENST00000560549 PLVAPQ9BX97 442 aa7.15□□□□□ -1.27
TMOD3-207ENST00000560549 NAGPAQ9UK23 515 aa7.15□□□□□ -1.27
TMOD3-207ENST00000560549 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 C1QTNF9BB2RNN3 333 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 M0R082 166 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 ZBTB39O15060 712 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 NID1P14543 1247 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 ILDR2Q71H61 639 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 ZNF417Q8TAU3 575 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 ZNF587Q96SQ5 575 aaPredicted RBP7.14□□□□□ -1.27
TMOD3-207ENST00000560549 KCNMB2Q9Y691 235 aa7.14□□□□□ -1.27
TMOD3-207ENST00000560549 ADAM23O75077 832 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
TMOD3-207ENST00000560549 SPATA31C1P0DKV0 1188 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 TARSP26639 723 aaKnown RBP7.13□□□□□ -1.27
TMOD3-207ENST00000560549 CHRNA4P43681 627 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 BAG6P46379 1132 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 CCINQ13939 588 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 TRIP4Q15650 581 aaPredicted RBP7.13□□□□□ -1.27
TMOD3-207ENST00000560549 KRT25Q7Z3Z0 450 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 RGL4Q8IZJ4 473 aa7.13□□□□□ -1.27
TMOD3-207ENST00000560549 RTCBQ9Y3I0 505 aaKnown RBP7.13□□□□□ -1.27
TMOD3-207ENST00000560549 MAP3K6O95382 1288 aa7.12□□□□□ -1.27
TMOD3-207ENST00000560549 RETREG2Q8NC44 543 aa7.12□□□□□ -1.27
TMOD3-207ENST00000560549 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
TMOD3-207ENST00000560549 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
TMOD3-207ENST00000560549 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 SASH3O75995 380 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 EPB42P16452 691 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 SSFA2P28290 1259 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
TMOD3-207ENST00000560549 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
TMOD3-207ENST00000560549 IGFLR1Q9H665 355 aa7.11□□□□□ -1.27
TMOD3-207ENST00000560549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.27
TMOD3-207ENST00000560549 DNAJB12Q9NXW2 375 aaKnown RBP7.11□□□□□ -1.27
TMOD3-207ENST00000560549 EGFRP00533 1210 aa7.1□□□□□ -1.27
TMOD3-207ENST00000560549 BRD2P25440 801 aaKnown RBP7.1□□□□□ -1.27
TMOD3-207ENST00000560549 PLAURQ03405 335 aa7.1□□□□□ -1.27
TMOD3-207ENST00000560549 MTMR3Q13615 1198 aa7.1□□□□□ -1.27
TMOD3-207ENST00000560549 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
TMOD3-207ENST00000560549 ATCAYQ86WG3 371 aa7.09□□□□□ -1.27
TMOD3-207ENST00000560549 PNMA5Q96PV4 448 aa7.09□□□□□ -1.27
TMOD3-207ENST00000560549 XYLBO75191 536 aa7.08□□□□□ -1.28
TMOD3-207ENST00000560549 RARAP10276 462 aa7.08□□□□□ -1.28
TMOD3-207ENST00000560549 ZAP70P43403 619 aa7.08□□□□□ -1.28
TMOD3-207ENST00000560549 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
TMOD3-207ENST00000560549 DHX32Q7L7V1 743 aaKnown RBP7.08□□□□□ -1.28
TMOD3-207ENST00000560549 TRPM4Q8TD43 1214 aa7.08□□□□□ -1.28
TMOD3-207ENST00000560549 STIM2Q9P246 746 aa7.08□□□□□ -1.28
TMOD3-207ENST00000560549 LILRB5O75023 590 aa7.07□□□□□ -1.28
TMOD3-207ENST00000560549 PRRT3Q5FWE3 981 aa7.07□□□□□ -1.28
TMOD3-207ENST00000560549 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
TMOD3-207ENST00000560549 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 K7ELQ4 463 aaPredicted RBP7.06□□□□□ -1.28
TMOD3-207ENST00000560549 MMP20O60882 483 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
TMOD3-207ENST00000560549 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
TMOD3-207ENST00000560549 GRIK5Q16478 980 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 HELQQ8TDG4 1101 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 GPR152Q8TDT2 470 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 BAZ1AQ9NRL2 1556 aaPredicted RBP7.06□□□□□ -1.28
TMOD3-207ENST00000560549 SMARCA4P51532 1647 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 WIZO95785 1651 aa7.06□□□□□ -1.28
TMOD3-207ENST00000560549 HOXD8P13378 290 aaPredicted RBP7.05□□□□□ -1.28
TMOD3-207ENST00000560549 GPLD1P80108 840 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 PCSK7Q16549 785 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 PSAPL1Q6NUJ1 521 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
TMOD3-207ENST00000560549 TTC9Q92623 222 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 TRAIPQ9BWF2 469 aa7.05□□□□□ -1.28
TMOD3-207ENST00000560549 CPB1P15086 417 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 MPSTP25325 297 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
TMOD3-207ENST00000560549 FURINP09958 794 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 GATA4P43694 442 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 NRLP54845 237 aa7.04□□□□□ -1.28
TMOD3-207ENST00000560549 TRIM28Q13263 835 aaKnown RBP7.04□□□□□ -1.28
TMOD3-207ENST00000560549 TLR7Q9NYK1 1049 aaKnown RBP7.04□□□□□ -1.28
TMOD3-207ENST00000560549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.04□□□□□ -1.28
TMOD3-207ENST00000560549 CUX2O14529 1486 aa7.03□□□□□ -1.28
TMOD3-207ENST00000560549 A0A0A0MRY4 1105 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms