RNA–Protein interactions for RNA: ENST00000559743.1

EXD1-205, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-205ENST00000559743 TMX4Q9H1E5 349 aaPredicted RBP6.86□□□□□ -1.31
EXD1-205ENST00000559743 RRP7AQ9Y3A4 280 aaKnown RBP6.86□□□□□ -1.31
EXD1-205ENST00000559743 SIPA1L3O60292 1781 aaPredicted RBP6.86□□□□□ -1.31
EXD1-205ENST00000559743 DLEC1Q9Y238 1755 aa6.86□□□□□ -1.31
EXD1-205ENST00000559743 PRAMEF22A3QJZ6 481 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 POTECB2RU33 542 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 NBPF26B4DH59 902 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 DDNO94850 711 aaPredicted RBP6.85□□□□□ -1.31
EXD1-205ENST00000559743 HOXB3P14651 431 aaPredicted RBP6.85□□□□□ -1.31
EXD1-205ENST00000559743 EIF4A1P60842 406 aaKnown RBP6.85□□□□□ -1.31
EXD1-205ENST00000559743 HTRA3P83110 453 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 NBPF10Q6P3W6 841 aaKnown RBP6.85□□□□□ -1.31
EXD1-205ENST00000559743 PPP1R42Q7Z4L9 355 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 PNMA8AQ86V59 439 aaPredicted RBP6.85□□□□□ -1.31
EXD1-205ENST00000559743 NGEFQ8N5V2 710 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 C7orf43Q8WVR3 580 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 JDP2Q8WYK2 163 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 BABAM1Q9NWV8 329 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 MIS18AQ9NYP9 233 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 CCDC88AQ3V6T2 1871 aa6.85□□□□□ -1.31
EXD1-205ENST00000559743 WDR90Q96KV7 1748 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 ERBB4Q15303 1308 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 MAP3K15Q6ZN16 1313 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 TBC1D12O60347 775 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 MYL6BP14649 208 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 LMOD3Q0VAK6 560 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 RALBP1Q15311 655 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 HLFQ16534 295 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 PARP10Q53GL7 1025 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 LDHDQ86WU2 507 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 SYNE4Q8N205 404 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 RPGRQ92834 1020 aaKnown RBP6.84□□□□□ -1.31
EXD1-205ENST00000559743 RBM17Q96I25 401 aaKnown RBP6.84□□□□□ -1.31
EXD1-205ENST00000559743 PLEKHF1Q96S99 279 aa6.84□□□□□ -1.31
EXD1-205ENST00000559743 SCN7AQ01118 1682 aa6.84□□□□□ -1.32
EXD1-205ENST00000559743 DPYSL4O14531 572 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 RIMBP2O15034 1052 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 PRKCSHP14314 528 aaPredicted RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 IARSP41252 1262 aaKnown RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 EIF6P56537 245 aaKnown RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 RIPK4P57078 832 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 GIGYF2Q6Y7W6 1299 aaKnown RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 NLRP3Q96P20 1036 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 PSMD1Q99460 953 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 VPS33BQ9H267 617 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 ZNF277Q9NRM2 450 aaPredicted RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 TSPYL4Q9UJ04 414 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 HACL1Q9UJ83 578 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 DICER1Q9UPY3 1922 aaKnown RBP6.83□□□□□ -1.32
EXD1-205ENST00000559743 FER1L6Q2WGJ9 1857 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 ANKRD31Q8N7Z5 1873 aa6.83□□□□□ -1.32
EXD1-205ENST00000559743 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
EXD1-205ENST00000559743 ZNF316A6NFI3 1004 aaPredicted RBP6.82□□□□□ -1.32
EXD1-205ENST00000559743 FZD9O00144 591 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
EXD1-205ENST00000559743 CRY2Q49AN0 593 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 HSP90AB3PQ58FF7 597 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 ZNF34Q8IZ26 560 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 TNS4Q8IZW8 715 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 GPC2Q8N158 579 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 CRAMP1Q96RY5 1269 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 SLX4Q8IY92 1834 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 BCORQ6W2J9 1755 aa6.82□□□□□ -1.32
EXD1-205ENST00000559743 PCNTO95613 3336 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 RNF123Q5XPI4 1314 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 TMEM88BA6NKF7 163 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 BBOX1O75936 387 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 HSPA1AP0DMV8 641 aaKnown RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 HSPA1BP0DMV9 641 aaKnown RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 EIF2S2P20042 333 aaKnown RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 GPTP24298 496 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 EPHX2P34913 555 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 EAPPQ56P03 285 aaPredicted RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 SLC10A5Q5PT55 438 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 COL13A1Q5TAT6 717 aaPredicted RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 SUSD4Q5VX71 490 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 SUPT20HQ8NEM7 779 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 UTP14AQ9BVJ6 771 aaKnown RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 ZBTB3Q9H5J0 574 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 PCDHGA4Q9Y5G9 962 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 TIAM2Q8IVF5 1701 aa6.81□□□□□ -1.32
EXD1-205ENST00000559743 IBTKQ9P2D0 1353 aaPredicted RBP6.81□□□□□ -1.32
EXD1-205ENST00000559743 TMPOP42166 694 aaKnown RBP6.8□□□□□ -1.32
EXD1-205ENST00000559743 MAP3K9P80192 1104 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 WDR43Q15061 677 aaKnown RBP eCLIP6.8□□□□□ -1.32
EXD1-205ENST00000559743 DEFB115Q30KQ5 88 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 RIC1Q4ADV7 1423 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 CNTROBQ8N137 903 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 LARGE2Q8N3Y3 721 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
EXD1-205ENST00000559743 CHMP4AQ9BY43 222 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 SCN4AP35499 1836 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 ARFGEF2Q9Y6D5 1785 aa6.8□□□□□ -1.32
EXD1-205ENST00000559743 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms