RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ZNF34Q8IZ26 560 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 MPNDQ8N594 471 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 ZC3H15Q8WU90 426 aaKnown RBP14.31□□□□□ -0.12
TRAF3-207ENST00000559734 VPS33BQ9H267 617 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
TRAF3-207ENST00000559734 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
TRAF3-207ENST00000559734 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
TRAF3-207ENST00000559734 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
TRAF3-207ENST00000559734 KIAA2012Q0VF49 1180 aa14.29□□□□□ -0.12
TRAF3-207ENST00000559734 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
TRAF3-207ENST00000559734 RGMBQ6NW40 437 aa14.29□□□□□ -0.12
TRAF3-207ENST00000559734 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
TRAF3-207ENST00000559734 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-207ENST00000559734 PNISRQ8TF01 805 aaKnown RBP14.29□□□□□ -0.12
TRAF3-207ENST00000559734 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-207ENST00000559734 NEFMP07197 916 aa14.28□□□□□ -0.12
TRAF3-207ENST00000559734 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
TRAF3-207ENST00000559734 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-207ENST00000559734 SAMD7Q7Z3H4 446 aa14.28□□□□□ -0.12
TRAF3-207ENST00000559734 THUMPD2Q9BTF0 503 aaKnown RBP14.28□□□□□ -0.12
TRAF3-207ENST00000559734 GBA2Q9HCG7 927 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-207ENST00000559734 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-207ENST00000559734 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 ADM5C9JUS6 153 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 TRPA1O75762 1119 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-207ENST00000559734 ZNF157P51786 506 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-207ENST00000559734 TBC1D10BQ4KMP7 808 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-207ENST00000559734 RBM26Q5T8P6 1007 aaKnown RBP14.27□□□□□ -0.13
TRAF3-207ENST00000559734 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
TRAF3-207ENST00000559734 KRT26Q7Z3Y9 468 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 SP8Q8IXZ3 490 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.13
TRAF3-207ENST00000559734 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
TRAF3-207ENST00000559734 BBOX1O75936 387 aa14.26□□□□□ -0.13
TRAF3-207ENST00000559734 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
TRAF3-207ENST00000559734 RNF186Q9NXI6 227 aa14.26□□□□□ -0.13
TRAF3-207ENST00000559734 SAGE1Q9NXZ1 904 aa14.26□□□□□ -0.13
TRAF3-207ENST00000559734 KDM3BQ7LBC6 1761 aa14.26□□□□□ -0.13
TRAF3-207ENST00000559734 ANXA1P04083 346 aa14.25□□□□□ -0.13
TRAF3-207ENST00000559734 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
TRAF3-207ENST00000559734 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
TRAF3-207ENST00000559734 SLC10A5Q5PT55 438 aa14.25□□□□□ -0.13
TRAF3-207ENST00000559734 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
TRAF3-207ENST00000559734 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
TRAF3-207ENST00000559734 DCPSQ96C86 337 aaKnown RBP14.25□□□□□ -0.13
TRAF3-207ENST00000559734 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
TRAF3-207ENST00000559734 PSMD14O00487 310 aa14.24□□□□□ -0.13
TRAF3-207ENST00000559734 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
TRAF3-207ENST00000559734 EGFRP00533 1210 aa14.24□□□□□ -0.13
TRAF3-207ENST00000559734 GRAPQ13588 217 aa14.24□□□□□ -0.13
TRAF3-207ENST00000559734 CTU1Q7Z7A3 348 aaKnown RBP14.24□□□□□ -0.13
TRAF3-207ENST00000559734 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-207ENST00000559734 ERBB4Q15303 1308 aa14.23□□□□□ -0.13
TRAF3-207ENST00000559734 AIMP1Q12904 312 aaKnown RBP14.23□□□□□ -0.13
TRAF3-207ENST00000559734 TRMT112Q9UI30 125 aaKnown RBP14.23□□□□□ -0.13
TRAF3-207ENST00000559734 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 SLC10A3P09131 477 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 DPF2Q92785 391 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 TSPYL4Q9UJ04 414 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
TRAF3-207ENST00000559734 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
TRAF3-207ENST00000559734 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 KIF4BQ2VIQ3 1234 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 SULF1Q8IWU6 871 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 GGA3Q9NZ52 723 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 LAMB2P55268 1798 aa14.21□□□□□ -0.13
TRAF3-207ENST00000559734 SH3TC1Q8TE82 1336 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 ECE2O60344 883 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
TRAF3-207ENST00000559734 ASTN2O75129 1339 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-207ENST00000559734 PDIA6Q15084 440 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
TRAF3-207ENST00000559734 COPS6Q7L5N1 327 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 TMC4Q7Z404 712 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 LRP10Q7Z4F1 713 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 XAGE3Q8WTP9 111 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 CDCA5Q96FF9 252 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 DLG5Q8TDM6 1919 aa14.19□□□□□ -0.14
TRAF3-207ENST00000559734 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
TRAF3-207ENST00000559734 RPS12P25398 132 aaKnown RBP14.18□□□□□ -0.14
TRAF3-207ENST00000559734 GPSM2P81274 684 aa14.18□□□□□ -0.14
TRAF3-207ENST00000559734 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
TRAF3-207ENST00000559734 CELF1Q92879 486 aaKnown RBP14.18□□□□□ -0.14
TRAF3-207ENST00000559734 ANKRD36CQ5JPF3 1778 aa14.18□□□□□ -0.14
TRAF3-207ENST00000559734 RTL9Q8NET4 1388 aa14.18□□□□□ -0.14
TRAF3-207ENST00000559734 TAF1P21675 1872 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 G3V3G9 751 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 TCIRG1Q13488 830 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms