RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 SYCE3A1L190 88 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 GOLGA8KD6RF30 607 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CTIFO43310 598 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 KDM4AO75164 1064 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PIP4K2BP78356 416 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 APBA1Q02410 837 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PWP2Q15269 919 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SNCBQ16143 134 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MAP3K11Q16584 847 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TSR1Q2NL82 804 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 KIF4BQ2VIQ3 1234 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TBC1D9Q6ZT07 1266 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ARMC9Q7Z3E5 817 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 EGFL6Q8IUX8 553 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 EHBP1Q8NDI1 1231 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 DDX12PQ92771 950 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 P3H4Q92791 437 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 JAKMIP2Q96AA8 810 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PPP1R14BQ96C90 147 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CABS1Q96KC9 395 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ZMAT2Q96NC0 199 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ZNF692Q9BU19 519 aaPredicted RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TRIM5Q9C035 493 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SCAND2PQ9GZW5 306 aaPredicted RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ABCF2Q9UG63 623 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 DNAI1Q9UI46 699 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 FAN1Q9Y2M0 1017 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CDK12Q9NYV4 1490 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 DEPDC5O75140 1603 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 RIOK3O14730 519 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 KRT85P78386 507 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 SEPT6Q14141 434 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CDC37Q16543 378 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 JAKMIP1Q96N16 626 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZBTB40Q9NUA8 1239 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 UTP6Q9NYH9 597 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 LARSQ9P2J5 1176 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 NOB1Q9ULX3 412 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 PLCH2O75038 1416 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ERVK-7P63135 1459 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 LIN7AO14910 233 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 RAB11FIP3O75154 756 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 GNAI3P08754 354 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 U2AF2P26368 475 aaKnown RBP eCLIP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 RAD51AP2Q09MP3 1159 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 BIRC2Q13490 618 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC121Q6ZUS5 278 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 BRAPQ7Z569 592 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 DZIP1Q86YF9 867 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZNF280CQ8ND82 737 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC47Q96A33 483 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 TTC14Q96N46 770 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZNF396Q96N95 335 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 KIF2CQ99661 725 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 NUP62CLQ9H1M0 184 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 VCX3BQ9H321 246 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 VCX3AQ9NNX9 186 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 FRMD4BQ9Y2L6 1034 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CDC42BPGQ6DT37 1551 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 PRC1O43663 620 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZKSCAN1P17029 563 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 GCKP35557 465 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 GORABQ5T7V8 394 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 SPECC1LQ69YQ0 1117 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 OLFM4Q6UX06 510 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZNF365Q70YC5 407 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC102AQ96A19 550 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC114Q96M63 670 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CWC25Q9NXE8 425 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 NRXN1Q9ULB1 1477 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CPSF1Q10570 1443 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 PHLPP2Q6ZVD8 1323 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ADGRL3Q9HAR2 1447 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 TTC41PQ6P2S7 1318 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ENO4A6NNW6 628 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 EFCAB8A8MWE9 144 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 DNAJC8O75937 253 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 TRIM27P14373 513 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 SEPT2Q15019 361 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 RINLQ6ZS11 566 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CROCCP2Q86T23 111 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 OSCARQ8IYS5 282 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CNTROBQ8N137 903 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 FBF1Q8TES7 1133 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 THUMPD2Q9BTF0 503 aaKnown RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 TEX13AQ9BXU3 409 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 TRIM6Q9C030 488 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 LNPKQ9C0E8 428 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 RBSNQ9H1K0 784 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.74□□□□□ -1.97
RGPD1-204ENST00000559485 CFAP45Q9UL16 551 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 PCDHB15Q9Y5E8 787 aa2.74□□□□□ -1.97
RGPD1-204ENST00000559485 ANKRD26Q9UPS8 1709 aa2.73□□□□□ -1.97
RGPD1-204ENST00000559485 QRICH2Q9H0J4 1663 aa2.73□□□□□ -1.97
RGPD1-204ENST00000559485 MYO1CO00159 1063 aa2.73□□□□□ -1.97
RGPD1-204ENST00000559485 CHUKO15111 745 aa2.73□□□□□ -1.97
RGPD1-204ENST00000559485 MYCNP04198 464 aaPredicted RBP2.73□□□□□ -1.97
RGPD1-204ENST00000559485 PRIM1P49642 420 aaKnown RBP2.73□□□□□ -1.97
RGPD1-204ENST00000559485 SLC8A3P57103 927 aa2.73□□□□□ -1.97
RGPD1-204ENST00000559485 MRPS25P82663 173 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms