RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 FAM161AQ3B820 660 aa20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 MTFR1LQ9H019 292 aa20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 SPEF2Q9C093 1822 aa20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 SOCS7O14512 581 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 HDAC1Q13547 482 aaPredicted RBP20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 KLHDC4Q8TBB5 520 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 GREM2Q9H772 168 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 RIC1Q4ADV7 1423 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 NPHP1O15259 732 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 SGIP1Q9BQI5 828 aa20.34■□□□□ 0.85
TNFAIP2-205ENST00000559406 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.84
TNFAIP2-205ENST00000559406 PA2G4Q9UQ80 394 aaKnown RBP20.33■□□□□ 0.84
TNFAIP2-205ENST00000559406 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.84
TNFAIP2-205ENST00000559406 ST5P78524 1137 aa20.32■□□□□ 0.84
TNFAIP2-205ENST00000559406 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
TNFAIP2-205ENST00000559406 PTGER2P43116 358 aa20.31■□□□□ 0.84
TNFAIP2-205ENST00000559406 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
TNFAIP2-205ENST00000559406 ZNF594Q96JF6 807 aaPredicted RBP20.31■□□□□ 0.84
TNFAIP2-205ENST00000559406 SEC31BQ9NQW1 1179 aa20.31■□□□□ 0.84
TNFAIP2-205ENST00000559406 PTPN12Q05209 780 aaKnown RBP20.3■□□□□ 0.84
TNFAIP2-205ENST00000559406 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
TNFAIP2-205ENST00000559406 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
TNFAIP2-205ENST00000559406 ITGA6P23229 1130 aa20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 RWDD1Q9H446 243 aaPredicted RBP20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 KIAA1551Q9HCM1 1747 aa20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 LRP5O75197 1615 aa20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 EXOC6BQ9Y2D4 811 aa20.29■□□□□ 0.84
TNFAIP2-205ENST00000559406 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 CCDC152Q4G0S7 254 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
TNFAIP2-205ENST00000559406 HMMRO75330 724 aa20.27■□□□□ 0.84
TNFAIP2-205ENST00000559406 HSP90B1P14625 803 aaKnown RBP20.27■□□□□ 0.84
TNFAIP2-205ENST00000559406 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 SLC51AQ86UW1 340 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 SMC5Q8IY18 1101 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 PUS3Q9BZE2 481 aaKnown RBP20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 SIL1Q9H173 461 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 A0A1B0GUL6 1792 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 CCDC57Q2TAC2 916 aa20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 NOP58Q9Y2X3 529 aaKnown RBP20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.26■□□□□ 0.83
TNFAIP2-205ENST00000559406 DLEC1Q9Y238 1755 aa20.25■□□□□ 0.83
TNFAIP2-205ENST00000559406 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
TNFAIP2-205ENST00000559406 LRRC24Q50LG9 513 aa20.25■□□□□ 0.83
TNFAIP2-205ENST00000559406 CELF1Q92879 486 aaKnown RBP20.25■□□□□ 0.83
TNFAIP2-205ENST00000559406 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
TNFAIP2-205ENST00000559406 POLD1P28340 1107 aa20.24■□□□□ 0.83
TNFAIP2-205ENST00000559406 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 SKAP1Q86WV1 359 aa20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 APBB1O00213 710 aa20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 SRGNP10124 158 aa20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 CHRNA5P30532 468 aa20.23■□□□□ 0.83
TNFAIP2-205ENST00000559406 SASH1O94885 1247 aa20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 HOXA10P31260 410 aaPredicted RBP20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 PDE6BP35913 854 aa20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 SMARCA5O60264 1052 aaPredicted RBP20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 C2CD5Q86YS7 1000 aa20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 RPGRQ92834 1020 aaKnown RBP20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 GCC1Q96CN9 775 aa20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 SPON1Q9HCB6 807 aa20.21■□□□□ 0.83
TNFAIP2-205ENST00000559406 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 EYA2O00167 538 aa20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 DDX46Q7L014 1031 aaKnown RBP20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 RIPOR2Q9Y4F9 1068 aa20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 BRCA1P38398 1863 aaKnown RBP20.2■□□□□ 0.82
TNFAIP2-205ENST00000559406 LDHAL6AQ6ZMR3 332 aa20.19■□□□□ 0.82
TNFAIP2-205ENST00000559406 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
TNFAIP2-205ENST00000559406 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
TNFAIP2-205ENST00000559406 GOLGB1Q14789 3259 aaKnown RBP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 GRAPQ13588 217 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 GRAPLQ8TC17 118 aaPredicted RBP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 CDC5LQ99459 802 aaKnown RBP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 CIAO1O76071 339 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 NPR1P16066 1061 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 KCNA3P22001 575 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 RPS8P62241 208 aaKnown RBP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 ANKRD45Q5TZF3 282 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 RHPN1Q8TCX5 695 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 RBM17Q96I25 401 aaKnown RBP20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 LRRC37AA6NMS7 1700 aa20.18■□□□□ 0.82
TNFAIP2-205ENST00000559406 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
TNFAIP2-205ENST00000559406 NUCB1Q02818 461 aa20.17■□□□□ 0.82
TNFAIP2-205ENST00000559406 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
TNFAIP2-205ENST00000559406 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
TNFAIP2-205ENST00000559406 H0YIN7 160 aa20.16■□□□□ 0.82
TNFAIP2-205ENST00000559406 DPEP1P16444 411 aa20.16■□□□□ 0.82
TNFAIP2-205ENST00000559406 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms