RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
CLPX-204ENST00000559152 PDIA4P13667 645 aaKnown RBP13.54□□□□□ -0.24
CLPX-204ENST00000559152 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
CLPX-204ENST00000559152 RUFY3Q7L099 469 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 ATG9AQ7Z3C6 839 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
CLPX-204ENST00000559152 KRT32Q14532 448 aa13.53□□□□□ -0.24
CLPX-204ENST00000559152 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
CLPX-204ENST00000559152 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
CLPX-204ENST00000559152 A0A0D9SFI3 127 aa13.52□□□□□ -0.24
CLPX-204ENST00000559152 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.24
CLPX-204ENST00000559152 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.24
CLPX-204ENST00000559152 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.24
CLPX-204ENST00000559152 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.24
CLPX-204ENST00000559152 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.24
CLPX-204ENST00000559152 JCADQ9P266 1359 aa13.52□□□□□ -0.24
CLPX-204ENST00000559152 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
CLPX-204ENST00000559152 ALDH8A1Q9H2A2 487 aaPredicted RBP13.52□□□□□ -0.25
CLPX-204ENST00000559152 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
CLPX-204ENST00000559152 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
CLPX-204ENST00000559152 TJP1Q07157 1748 aa13.52□□□□□ -0.25
CLPX-204ENST00000559152 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
CLPX-204ENST00000559152 SLC27A2O14975 620 aa13.51□□□□□ -0.25
CLPX-204ENST00000559152 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
CLPX-204ENST00000559152 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
CLPX-204ENST00000559152 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
CLPX-204ENST00000559152 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
CLPX-204ENST00000559152 RPAP1Q9BWH6 1393 aaPredicted RBP13.51□□□□□ -0.25
CLPX-204ENST00000559152 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
CLPX-204ENST00000559152 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
CLPX-204ENST00000559152 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
CLPX-204ENST00000559152 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
CLPX-204ENST00000559152 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 TAF5LO75529 589 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 MBD3O95983 291 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 CSF1RP07333 972 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 GRPEL1Q9HAV7 217 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 HELLSQ9NRZ9 838 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
CLPX-204ENST00000559152 PRPF40AO75400 957 aaKnown RBP13.49□□□□□ -0.25
CLPX-204ENST00000559152 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLPX-204ENST00000559152 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
CLPX-204ENST00000559152 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 PAG1Q9NWQ8 432 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 A0A1B0GUL7 405 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 IFIT5Q13325 482 aaKnown RBP13.49□□□□□ -0.25
CLPX-204ENST00000559152 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 ARXQ96QS3 562 aa13.49□□□□□ -0.25
CLPX-204ENST00000559152 ZNF609O15014 1411 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
CLPX-204ENST00000559152 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
CLPX-204ENST00000559152 TIMM10P62072 90 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 DDB1Q16531 1140 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 ZNF589Q86UQ0 364 aaPredicted RBP13.48□□□□□ -0.25
CLPX-204ENST00000559152 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
CLPX-204ENST00000559152 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 ITGB4P16144 1822 aa13.48□□□□□ -0.25
CLPX-204ENST00000559152 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
CLPX-204ENST00000559152 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
CLPX-204ENST00000559152 ZNF445P59923 1031 aa13.47□□□□□ -0.25
CLPX-204ENST00000559152 DDX46Q7L014 1031 aaKnown RBP13.47□□□□□ -0.25
CLPX-204ENST00000559152 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
CLPX-204ENST00000559152 ZNF594Q96JF6 807 aaPredicted RBP13.47□□□□□ -0.25
CLPX-204ENST00000559152 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
CLPX-204ENST00000559152 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
CLPX-204ENST00000559152 AK7Q96M32 723 aa13.47□□□□□ -0.25
CLPX-204ENST00000559152 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
CLPX-204ENST00000559152 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
CLPX-204ENST00000559152 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
CLPX-204ENST00000559152 GOLIM4O00461 696 aa13.46□□□□□ -0.25
CLPX-204ENST00000559152 STX6O43752 255 aa13.46□□□□□ -0.25
CLPX-204ENST00000559152 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.25
CLPX-204ENST00000559152 ZSCAN22P10073 491 aaPredicted RBP13.46□□□□□ -0.25
CLPX-204ENST00000559152 CPA1P15085 419 aa13.46□□□□□ -0.25
CLPX-204ENST00000559152 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
CLPX-204ENST00000559152 SPEF2Q9C093 1822 aa13.46□□□□□ -0.26
CLPX-204ENST00000559152 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 DSCC1Q9BVC3 393 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 PDCP20941 246 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 HLFQ16534 295 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 TTC39AQ5SRH9 613 aa13.45□□□□□ -0.26
CLPX-204ENST00000559152 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 CAVIN1Q6NZI2 390 aaKnown RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
CLPX-204ENST00000559152 CCDC83Q8IWF9 413 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms