RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 UBAP2LQ14157 1087 aaKnown RBP17.88■□□□□ 0.45
CASC4-208ENST00000559151 TMEM87AQ8NBN3 555 aa17.88■□□□□ 0.45
CASC4-208ENST00000559151 EPS8L3Q8TE67 593 aaKnown RBP17.88■□□□□ 0.45
CASC4-208ENST00000559151 ABI2Q9NYB9 513 aaPredicted RBP17.88■□□□□ 0.45
CASC4-208ENST00000559151 EFSO43281 561 aa17.87■□□□□ 0.45
CASC4-208ENST00000559151 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
CASC4-208ENST00000559151 PCDHGC4Q9Y5F7 938 aa17.87■□□□□ 0.45
CASC4-208ENST00000559151 SCAMP3O14828 347 aaKnown RBP17.86■□□□□ 0.45
CASC4-208ENST00000559151 FRMD6Q96NE9 622 aa17.86■□□□□ 0.45
CASC4-208ENST00000559151 C11orf16Q9NQ32 467 aa17.86■□□□□ 0.45
CASC4-208ENST00000559151 CUEDC1Q9NWM3 386 aaPredicted RBP17.86■□□□□ 0.45
CASC4-208ENST00000559151 AK5Q9Y6K8 562 aa17.86■□□□□ 0.45
CASC4-208ENST00000559151 EREGO14944 169 aa17.85■□□□□ 0.45
CASC4-208ENST00000559151 KRT25Q7Z3Z0 450 aa17.85■□□□□ 0.45
CASC4-208ENST00000559151 CCDC155Q8N6L0 562 aa17.85■□□□□ 0.45
CASC4-208ENST00000559151 SASH3O75995 380 aa17.84■□□□□ 0.45
CASC4-208ENST00000559151 DBN1Q16643 649 aa17.84■□□□□ 0.45
CASC4-208ENST00000559151 NPHS2Q9NP85 383 aa17.84■□□□□ 0.45
CASC4-208ENST00000559151 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
CASC4-208ENST00000559151 HDLBPQ00341 1268 aaKnown RBP17.83■□□□□ 0.44
CASC4-208ENST00000559151 TNP2Q05952 138 aa17.83■□□□□ 0.44
CASC4-208ENST00000559151 H7C1W4 665 aa17.82■□□□□ 0.44
CASC4-208ENST00000559151 MAPTP10636 758 aaKnown RBP17.82■□□□□ 0.44
CASC4-208ENST00000559151 GRIN2CQ14957 1233 aa17.82■□□□□ 0.44
CASC4-208ENST00000559151 TTC39BQ5VTQ0 682 aaPredicted RBP17.82■□□□□ 0.44
CASC4-208ENST00000559151 GSX2Q9BZM3 304 aa17.82■□□□□ 0.44
CASC4-208ENST00000559151 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
CASC4-208ENST00000559151 HCN2Q9UL51 889 aa17.82■□□□□ 0.44
CASC4-208ENST00000559151 EIF4BP23588 611 aaKnown RBP17.81■□□□□ 0.44
CASC4-208ENST00000559151 CCINQ13939 588 aa17.81■□□□□ 0.44
CASC4-208ENST00000559151 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
CASC4-208ENST00000559151 BNIP3LO60238 219 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 IGSF3O75054 1194 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 CTSHP09668 335 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 TARSP26639 723 aaKnown RBP17.8■□□□□ 0.44
CASC4-208ENST00000559151 TRIM22Q8IYM9 498 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 KIFC2Q96AC6 838 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 OSBPL7Q9BZF2 842 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
CASC4-208ENST00000559151 CYP2E1P05181 493 aaPredicted RBP17.79■□□□□ 0.44
CASC4-208ENST00000559151 GALNT12Q8IXK2 581 aa17.79■□□□□ 0.44
CASC4-208ENST00000559151 C12orf49Q9H741 205 aa17.79■□□□□ 0.44
CASC4-208ENST00000559151 NDFIP2Q9NV92 336 aa17.79■□□□□ 0.44
CASC4-208ENST00000559151 CES1P23141 567 aa17.78■□□□□ 0.44
CASC4-208ENST00000559151 CRELD1Q96HD1 420 aa17.78■□□□□ 0.44
CASC4-208ENST00000559151 KANSL3Q9P2N6 904 aa17.78■□□□□ 0.44
CASC4-208ENST00000559151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
CASC4-208ENST00000559151 LAMC2Q13753 1193 aa17.77■□□□□ 0.44
CASC4-208ENST00000559151 ABHD17AQ96GS6 310 aa17.77■□□□□ 0.44
CASC4-208ENST00000559151 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
CASC4-208ENST00000559151 ZFATQ9P243 1243 aa17.77■□□□□ 0.44
CASC4-208ENST00000559151 GMPR2Q9P2T1 348 aaKnown RBP17.77■□□□□ 0.44
CASC4-208ENST00000559151 FANCCQ00597 558 aa17.76■□□□□ 0.43
CASC4-208ENST00000559151 ZNF837Q96EG3 531 aaPredicted RBP17.76■□□□□ 0.43
CASC4-208ENST00000559151 MMP20O60882 483 aa17.75■□□□□ 0.43
CASC4-208ENST00000559151 RARAP10276 462 aa17.75■□□□□ 0.43
CASC4-208ENST00000559151 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
CASC4-208ENST00000559151 PMEPA1Q969W9 287 aa17.75■□□□□ 0.43
CASC4-208ENST00000559151 MARK1Q9P0L2 795 aa17.75■□□□□ 0.43
CASC4-208ENST00000559151 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
CASC4-208ENST00000559151 ITGA6P23229 1130 aa17.74■□□□□ 0.43
CASC4-208ENST00000559151 VEGFBP49765 207 aa17.74■□□□□ 0.43
CASC4-208ENST00000559151 GIPC1O14908 333 aa17.73■□□□□ 0.43
CASC4-208ENST00000559151 NFKB1P19838 968 aa17.73■□□□□ 0.43
CASC4-208ENST00000559151 CD33P20138 364 aa17.73■□□□□ 0.43
CASC4-208ENST00000559151 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
CASC4-208ENST00000559151 OR13H1Q8NG92 308 aa17.73■□□□□ 0.43
CASC4-208ENST00000559151 GTPBP3Q969Y2 492 aaKnown RBP17.73■□□□□ 0.43
CASC4-208ENST00000559151 PNMA5Q96PV4 448 aa17.73■□□□□ 0.43
CASC4-208ENST00000559151 METTL5Q9NRN9 209 aaKnown RBP17.73■□□□□ 0.43
CASC4-208ENST00000559151 SPEM2Q0P670 501 aa17.72■□□□□ 0.43
CASC4-208ENST00000559151 NXPE4Q6UWF7 544 aa17.72■□□□□ 0.43
CASC4-208ENST00000559151 SLC30A3Q99726 388 aa17.72■□□□□ 0.43
CASC4-208ENST00000559151 LATS2Q9NRM7 1088 aa17.72■□□□□ 0.43
CASC4-208ENST00000559151 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.43
CASC4-208ENST00000559151 RNF34Q969K3 372 aa17.71■□□□□ 0.43
CASC4-208ENST00000559151 BCO2Q9BYV7 579 aa17.71■□□□□ 0.43
CASC4-208ENST00000559151 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.71■□□□□ 0.43
CASC4-208ENST00000559151 PHF20L1A8MW92 1017 aa17.7■□□□□ 0.42
CASC4-208ENST00000559151 SNRPBP14678 240 aaKnown RBP17.7■□□□□ 0.42
CASC4-208ENST00000559151 ZNF76P36508 570 aa17.7■□□□□ 0.42
CASC4-208ENST00000559151 IRX2Q9BZI1 471 aaPredicted RBP17.7■□□□□ 0.42
CASC4-208ENST00000559151 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
CASC4-208ENST00000559151 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
CASC4-208ENST00000559151 SUV39H2Q9H5I1 410 aa17.69■□□□□ 0.42
CASC4-208ENST00000559151 ATXN7L1Q9ULK2 861 aaPredicted RBP17.69■□□□□ 0.42
CASC4-208ENST00000559151 USP17L7P0C7H9 530 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 GRM2Q14416 872 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 BHMTQ93088 406 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 C8orf37Q96NL8 207 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 FAM8A1Q9UBU6 413 aa17.68■□□□□ 0.42
CASC4-208ENST00000559151 ZC3H6P61129 1189 aaKnown RBP17.67■□□□□ 0.42
CASC4-208ENST00000559151 SALL4Q9UJQ4 1053 aa17.67■□□□□ 0.42
CASC4-208ENST00000559151 EDN3P14138 238 aa17.66■□□□□ 0.42
CASC4-208ENST00000559151 PEAR1Q5VY43 1037 aaPredicted RBP17.66■□□□□ 0.42
CASC4-208ENST00000559151 A0A1W2PP55 124 aa17.65■□□□□ 0.42
CASC4-208ENST00000559151 COL13A1Q5TAT6 717 aaPredicted RBP17.65■□□□□ 0.42
CASC4-208ENST00000559151 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
CASC4-208ENST00000559151 KIAA0319Q5VV43 1072 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms