RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NLRP2Q9NX02 1062 aa3.48□□□□□ -1.85
GABPB1-209ENST00000559100 A6NHS1 94 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 UBAP1LF5GYI3 381 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 PAX4O43316 350 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 CPNE3O75131 537 aaKnown RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 HSP90B1P14625 803 aaKnown RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 FANCCQ00597 558 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 ARSJQ5FYB0 599 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 C1orf53Q5VUE5 145 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 Q6ZVU0 165 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 ZNF438Q7Z4V0 828 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 FAM177A1Q8N128 213 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 CMTR1Q8N1G2 835 aaKnown RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 CRELD1Q96HD1 420 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 HSH2DQ96JZ2 352 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 FRMD6Q96NE9 622 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 INSM2Q96T92 566 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 FHDC1Q9C0D6 1143 aaPredicted RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 TGIF2Q9GZN2 237 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 GGNBP2Q9H3C7 697 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 METTL5Q9NRN9 209 aaKnown RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 INPP5FQ9Y2H2 1132 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 FNDC3AQ9Y2H6 1198 aaKnown RBP3.47□□□□□ -1.85
GABPB1-209ENST00000559100 HRH3Q9Y5N1 445 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 GJA3Q9Y6H8 435 aa3.47□□□□□ -1.85
GABPB1-209ENST00000559100 SOBPA7XYQ1 873 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 SMARCA5O60264 1052 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 GADD45BO75293 160 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 ATP2B1P20020 1258 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 CDK11BP21127 795 aaKnown RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 DNAJA1P31689 397 aaKnown RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 GTF2F1P35269 517 aaKnown RBP eCLIP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 IDH3AP50213 366 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 FOXD4L6Q3SYB3 417 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 C4orf17Q53FE4 359 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 MCTP1Q6DN14 999 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 FOXD4L3Q6VB84 417 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 HS2ST1Q7LGA3 356 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 METTL16Q86W50 562 aaKnown RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 KDF1Q8NAX2 398 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 DNAJC2Q99543 621 aaKnown RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 DNAJC25Q9H1X3 360 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 ACBD3Q9H3P7 528 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 SEMA6BQ9H3T3 888 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 ANKIB1Q9P2G1 1089 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 CDK11AQ9UQ88 783 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-209ENST00000559100 USP20Q9Y2K6 914 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 AK5Q9Y6K8 562 aa3.46□□□□□ -1.86
GABPB1-209ENST00000559100 CNTNAP5Q8WYK1 1306 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 TGFBR3LH3BV60 316 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 OPLAHO14841 1288 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 PPFIA3O75145 1194 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 PHACTR2O75167 634 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 IGHA2P01877 340 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 TNNI2P48788 182 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 ARSDP51689 593 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 ZNF394Q53GI3 561 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 NBPF10Q6P3W6 841 aaKnown RBP3.45□□□□□ -1.86
GABPB1-209ENST00000559100 POTEAQ6S8J7 498 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 LRRC69Q6ZNQ3 347 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 PRICKLE2Q7Z3G6 844 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 USP48Q86UV5 1035 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 ZNF654Q8IZM8 581 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 GPR161Q8N6U8 529 aaKnown RBP3.45□□□□□ -1.86
GABPB1-209ENST00000559100 EPS8L3Q8TE67 593 aaKnown RBP3.45□□□□□ -1.86
GABPB1-209ENST00000559100 SNX29Q8TEQ0 813 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 SUSD3Q96L08 255 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 ZFP42Q96MM3 310 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 TSEN34Q9BSV6 310 aaKnown RBP3.45□□□□□ -1.86
GABPB1-209ENST00000559100 PRKAG2Q9UGJ0 569 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 GGT7Q9UJ14 662 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 FOXD3Q9UJU5 478 aaPredicted RBP3.45□□□□□ -1.86
GABPB1-209ENST00000559100 BCS1LQ9Y276 419 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 PCDHGB7Q9Y5F8 929 aa3.45□□□□□ -1.86
GABPB1-209ENST00000559100 TNFRSF21O75509 655 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 BMP2P12643 396 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 TIMP2P16035 220 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 EPB42P16452 691 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 GPC1P35052 558 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 RNF144AP50876 292 aaPredicted RBP3.44□□□□□ -1.86
GABPB1-209ENST00000559100 RAD51AP2Q09MP3 1159 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 POU4F2Q12837 409 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 C6orf118Q5T5N4 469 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 LDLRAD1Q5T700 205 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 USPL1Q5W0Q7 1092 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 PI16Q6UXB8 463 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 BTLAQ7Z6A9 289 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 VPS37DQ86XT2 251 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 MEIOBQ8N635 442 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 ZNF280CQ8ND82 737 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 PMFBP1Q8TBY8 1022 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 DHX38Q92620 1227 aaKnown RBP3.44□□□□□ -1.86
GABPB1-209ENST00000559100 CCDC74AQ96AQ1 378 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 PUS7Q96PZ0 661 aaKnown RBP3.44□□□□□ -1.86
GABPB1-209ENST00000559100 CFHR5Q9BXR6 569 aa3.44□□□□□ -1.86
GABPB1-209ENST00000559100 COL25A1Q9BXS0 654 aaPredicted RBP3.44□□□□□ -1.86
GABPB1-209ENST00000559100 GRIP2Q9C0E4 1043 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms