RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 SRCAPQ6ZRS2 3230 aa19.69■□□□□ 0.74
CDC42BPB-204ENST00000559043 SMC5Q8IY18 1101 aa19.68■□□□□ 0.74
CDC42BPB-204ENST00000559043 PLA2G12BQ9BX93 195 aa19.68■□□□□ 0.74
CDC42BPB-204ENST00000559043 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
CDC42BPB-204ENST00000559043 PDE8AO60658 829 aa19.67■□□□□ 0.74
CDC42BPB-204ENST00000559043 LMBR1LQ6UX01 489 aa19.67■□□□□ 0.74
CDC42BPB-204ENST00000559043 TTLL11Q8NHH1 800 aa19.67■□□□□ 0.74
CDC42BPB-204ENST00000559043 CCDC85AQ96PX6 553 aaPredicted RBP19.67■□□□□ 0.74
CDC42BPB-204ENST00000559043 PNMA6EA0A0J9YXQ4 647 aa19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 CSF1RP07333 972 aa19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 RABL6Q3YEC7 729 aaPredicted RBP19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 NPHP1O15259 732 aa19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 CEP85Q6P2H3 762 aa19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
CDC42BPB-204ENST00000559043 TNRC6CQ9HCJ0 1690 aaKnown RBP19.65■□□□□ 0.74
CDC42BPB-204ENST00000559043 CTSWP56202 376 aa19.64■□□□□ 0.74
CDC42BPB-204ENST00000559043 ANKRD31Q8N7Z5 1873 aa19.64■□□□□ 0.74
CDC42BPB-204ENST00000559043 ATP8B2P98198 1209 aa19.64■□□□□ 0.73
CDC42BPB-204ENST00000559043 ST5P78524 1137 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 BRIP1Q9BX63 1249 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 GREM2Q9H772 168 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 KLRG2A4D1S0 409 aaPredicted RBP19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 SEC24BO95487 1268 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 MTX1Q13505 466 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 NBR1Q14596 966 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 SF3B3Q15393 1217 aaKnown RBP19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 NLRP3Q96P20 1036 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 SPON1Q9HCB6 807 aa19.63■□□□□ 0.73
CDC42BPB-204ENST00000559043 LAMB2P55268 1798 aa19.62■□□□□ 0.73
CDC42BPB-204ENST00000559043 POLD1P28340 1107 aa19.62■□□□□ 0.73
CDC42BPB-204ENST00000559043 SEC31BQ9NQW1 1179 aa19.62■□□□□ 0.73
CDC42BPB-204ENST00000559043 COL4A1P02462 1669 aa19.62■□□□□ 0.73
CDC42BPB-204ENST00000559043 RFX5P48382 616 aaPredicted RBP19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 KLHDC4Q8TBB5 520 aa19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 SRGAP3O43295 1099 aa19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 CRY2Q49AN0 593 aa19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 RPAP2Q8IXW5 612 aaPredicted RBP19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 HDAC5Q9UQL6 1122 aa19.61■□□□□ 0.73
CDC42BPB-204ENST00000559043 MYH3P11055 1940 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 TAF1P21675 1872 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 POLA2Q14181 598 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 CHMP3Q9Y3E7 222 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 RIC1Q4ADV7 1423 aa19.6■□□□□ 0.73
CDC42BPB-204ENST00000559043 C10orf71Q711Q0 1435 aa19.59■□□□□ 0.73
CDC42BPB-204ENST00000559043 NUCB1Q02818 461 aa19.59■□□□□ 0.73
CDC42BPB-204ENST00000559043 ZNF594Q96JF6 807 aaPredicted RBP19.59■□□□□ 0.73
CDC42BPB-204ENST00000559043 PA2G4Q9UQ80 394 aaKnown RBP19.59■□□□□ 0.73
CDC42BPB-204ENST00000559043 SRGNP10124 158 aa19.58■□□□□ 0.73
CDC42BPB-204ENST00000559043 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.73
CDC42BPB-204ENST00000559043 ITGA6P23229 1130 aa19.58■□□□□ 0.73
CDC42BPB-204ENST00000559043 CHRNA5P30532 468 aa19.58■□□□□ 0.73
CDC42BPB-204ENST00000559043 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
CDC42BPB-204ENST00000559043 CCDC152Q4G0S7 254 aa19.57■□□□□ 0.72
CDC42BPB-204ENST00000559043 SLC51AQ86UW1 340 aa19.57■□□□□ 0.72
CDC42BPB-204ENST00000559043 PDE6BP35913 854 aa19.57■□□□□ 0.72
CDC42BPB-204ENST00000559043 DAXXQ9UER7 740 aaPredicted RBP19.57■□□□□ 0.72
CDC42BPB-204ENST00000559043 CELF1Q92879 486 aaKnown RBP19.56■□□□□ 0.72
CDC42BPB-204ENST00000559043 GOLGB1Q14789 3259 aaKnown RBP19.56■□□□□ 0.72
CDC42BPB-204ENST00000559043 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 KCNA3P22001 575 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 C2CD5Q86YS7 1000 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 RTL9Q8NET4 1388 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 COL11A2P13942 1736 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 IFIT5Q13325 482 aaKnown RBP19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 CCDC57Q2TAC2 916 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 PUS3Q9BZE2 481 aaKnown RBP19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 KIF13BQ9NQT8 1826 aa19.55■□□□□ 0.72
CDC42BPB-204ENST00000559043 SLC4A3P48751 1232 aa19.54■□□□□ 0.72
CDC42BPB-204ENST00000559043 DPEP1P16444 411 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 CHD1LQ86WJ1 897 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 TBC1D32Q96NH3 1257 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 UPF2Q9HAU5 1272 aaKnown RBP19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 LRRC24Q50LG9 513 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
CDC42BPB-204ENST00000559043 H0YIN7 160 aa19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 SIL1Q9H173 461 aa19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 DCTPP1Q9H773 170 aa19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 EXOC6BQ9Y2D4 811 aa19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
CDC42BPB-204ENST00000559043 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.71
CDC42BPB-204ENST00000559043 NPR1P16066 1061 aa19.52■□□□□ 0.71
CDC42BPB-204ENST00000559043 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.71
CDC42BPB-204ENST00000559043 CD2APQ9Y5K6 639 aa19.52■□□□□ 0.71
CDC42BPB-204ENST00000559043 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
CDC42BPB-204ENST00000559043 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
CDC42BPB-204ENST00000559043 NLGN2Q8NFZ4 835 aa19.51■□□□□ 0.71
CDC42BPB-204ENST00000559043 ZNF622Q969S3 477 aaKnown RBP eCLIP19.51■□□□□ 0.718e-9■■□□□ 13.5
CDC42BPB-204ENST00000559043 MASTLQ96GX5 879 aa19.51■□□□□ 0.71
CDC42BPB-204ENST00000559043 CRAMP1Q96RY5 1269 aa19.51■□□□□ 0.71
CDC42BPB-204ENST00000559043 HMMRO75330 724 aa19.5■□□□□ 0.71
CDC42BPB-204ENST00000559043 RBM17Q96I25 401 aaKnown RBP19.5■□□□□ 0.71
CDC42BPB-204ENST00000559043 FHDC1Q9C0D6 1143 aaPredicted RBP19.5■□□□□ 0.71
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