RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
SMAD3-206ENST00000558739 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
SMAD3-206ENST00000558739 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
SMAD3-206ENST00000558739 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 ABCC4O15439 1325 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 RGL2O15211 777 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-206ENST00000558739 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
SMAD3-206ENST00000558739 UNC80Q8N2C7 3258 aa16.04■□□□□ 0.16
SMAD3-206ENST00000558739 NTSR2O95665 410 aa16.04■□□□□ 0.16
SMAD3-206ENST00000558739 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-206ENST00000558739 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
SMAD3-206ENST00000558739 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-206ENST00000558739 H7C1D1 291 aa16.03■□□□□ 0.16
SMAD3-206ENST00000558739 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
SMAD3-206ENST00000558739 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
SMAD3-206ENST00000558739 SCN9AQ15858 1988 aa16.02■□□□□ 0.16
SMAD3-206ENST00000558739 PSMD14O00487 310 aa16.02■□□□□ 0.16
SMAD3-206ENST00000558739 TNIP1Q15025 636 aa16.02■□□□□ 0.16
SMAD3-206ENST00000558739 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
SMAD3-206ENST00000558739 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
SMAD3-206ENST00000558739 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
SMAD3-206ENST00000558739 ZBTB3Q9H5J0 574 aa16.02■□□□□ 0.16
SMAD3-206ENST00000558739 COL4A1P02462 1669 aa16.02■□□□□ 0.15
SMAD3-206ENST00000558739 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 RBBP6Q7Z6E9 1792 aaKnown RBP16.01■□□□□ 0.15
SMAD3-206ENST00000558739 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
SMAD3-206ENST00000558739 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
SMAD3-206ENST00000558739 MOB2Q70IA6 237 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 MCM10Q7L590 875 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 CDCA5Q96FF9 252 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 GGA3Q9NZ52 723 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
SMAD3-206ENST00000558739 RTL9Q8NET4 1388 aa16■□□□□ 0.15
SMAD3-206ENST00000558739 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
SMAD3-206ENST00000558739 MPNDQ8N594 471 aa15.99■□□□□ 0.15
SMAD3-206ENST00000558739 SUPT20HQ8NEM7 779 aa15.99■□□□□ 0.15
SMAD3-206ENST00000558739 DCPSQ96C86 337 aaKnown RBP15.99■□□□□ 0.15
SMAD3-206ENST00000558739 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
SMAD3-206ENST00000558739 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
SMAD3-206ENST00000558739 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
SMAD3-206ENST00000558739 VCANP13611 3396 aa15.99■□□□□ 0.15
SMAD3-206ENST00000558739 GPR25O00155 361 aa15.98■□□□□ 0.15
SMAD3-206ENST00000558739 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
SMAD3-206ENST00000558739 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
SMAD3-206ENST00000558739 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
SMAD3-206ENST00000558739 DLL1O00548 723 aa15.97■□□□□ 0.15
SMAD3-206ENST00000558739 MKRN3Q13064 507 aaKnown RBP15.97■□□□□ 0.15
SMAD3-206ENST00000558739 KIF4BQ2VIQ3 1234 aa15.97■□□□□ 0.15
SMAD3-206ENST00000558739 ZNF34Q8IZ26 560 aa15.97■□□□□ 0.15
SMAD3-206ENST00000558739 DPF2Q92785 391 aa15.97■□□□□ 0.15
SMAD3-206ENST00000558739 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
SMAD3-206ENST00000558739 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
SMAD3-206ENST00000558739 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-206ENST00000558739 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
SMAD3-206ENST00000558739 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
SMAD3-206ENST00000558739 MYL6BP14649 208 aa15.95■□□□□ 0.14
SMAD3-206ENST00000558739 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
SMAD3-206ENST00000558739 SP8Q8IXZ3 490 aa15.95■□□□□ 0.14
SMAD3-206ENST00000558739 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
SMAD3-206ENST00000558739 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
SMAD3-206ENST00000558739 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
SMAD3-206ENST00000558739 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-206ENST00000558739 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
SMAD3-206ENST00000558739 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SMAD3-206ENST00000558739 UBE2Q2LH0YL09 131 aa15.93■□□□□ 0.14
SMAD3-206ENST00000558739 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
SMAD3-206ENST00000558739 EN2P19622 333 aaPredicted RBP15.93■□□□□ 0.14
SMAD3-206ENST00000558739 ANGEL2Q5VTE6 544 aaKnown RBP15.93■□□□□ 0.14
SMAD3-206ENST00000558739 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
SMAD3-206ENST00000558739 FKTNO75072 461 aa15.92■□□□□ 0.14
SMAD3-206ENST00000558739 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-206ENST00000558739 DOK7Q18PE1 504 aa15.92■□□□□ 0.14
SMAD3-206ENST00000558739 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
SMAD3-206ENST00000558739 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-206ENST00000558739 ECE2O60344 883 aa15.91■□□□□ 0.14
SMAD3-206ENST00000558739 BBOX1O75936 387 aa15.91■□□□□ 0.14
SMAD3-206ENST00000558739 GRAPQ13588 217 aa15.9■□□□□ 0.14
SMAD3-206ENST00000558739 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
SMAD3-206ENST00000558739 NOM1Q5C9Z4 860 aaKnown RBP15.9■□□□□ 0.14
SMAD3-206ENST00000558739 SLC10A5Q5PT55 438 aa15.9■□□□□ 0.14
SMAD3-206ENST00000558739 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
SMAD3-206ENST00000558739 GRAPLQ8TC17 118 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-206ENST00000558739 UTP14AQ9BVJ6 771 aaKnown RBP15.9■□□□□ 0.14
SMAD3-206ENST00000558739 POLLQ9UGP5 575 aa15.9■□□□□ 0.14
SMAD3-206ENST00000558739 TRIM17Q9Y577 477 aa15.9■□□□□ 0.14
SMAD3-206ENST00000558739 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
SMAD3-206ENST00000558739 TM4SF4P48230 202 aa15.89■□□□□ 0.13
SMAD3-206ENST00000558739 SCARF1Q14162 830 aa15.89■□□□□ 0.13
SMAD3-206ENST00000558739 OTOP1Q7RTM1 612 aa15.89■□□□□ 0.13
SMAD3-206ENST00000558739 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms